Homo sapiens

Endothelial cell Kidney interstitial fibroblast Blood vessel smooth muscle cell Kidney collecting duct intercalated cell Leukocyte Macrophage Kidney distal convoluted tubule epithelial cell Kidney collecting duct principal cell Kidney loop of henle thick ascending limb epithelial cell Kidney proximal convoluted tubule epithelial cell

Renal medulla

50-year-old stage

Normal

Male

Slide-seqv2

Homo sapiens

Afferent neuron Enteric neuron Enteroglial cell Inhibitory motor neuron Neuroblast (sensu vertebrata) Motor neuron Interneuron

Ascending colon Colonic mucosa Stomach Duodenum Rectosigmoid junction Pyloric antrum Caecum Small intestine Gingiva Ileum Colon Intestine Buccal mucosa Body of stomach Pylorus Rectum Esophagus Jejunum Transverse colon Periodontium Descending colon Sigmoid colon Labial gland Mesenteric lymph node

66-year-old stage Carnegie stage 19 19th week post-fertilization stage 13-year-old stage 65-year-old stage 26-year-old stage Sixth decade stage 13th week post-fertilization stage 85-year-old stage 52-year-old stage 54-year-old stage 30-year-old stage 44-year-old stage 29-year-old stage 56-year-old stage 55-year-old stage 84-year-old stage 15th week post-fertilization stage 50-year-old stage 28-year-old stage 51-year-old stage 17th week post-fertilization stage 57-year-old stage 12-year-old stage 12th week post-fertilization stage Third decade stage 16th week post-fertilization stage 81-year-old stage 9th week post-fertilization stage 9-year-old stage 10th week post-fertilization stage 14-year-old stage 24-year-old stage 23-year-old stage 35-year-old stage Seventh decade stage Embryonic stage 59-year-old stage 67-year-old stage 18th week post-fertilization stage Carnegie stage 17 2-month-old stage 77-year-old stage 33-year-old stage Carnegie stage 22 45-year-old stage 62-year-old stage 86-year-old stage 60-year-old stage 31-year-old stage 22-year-old stage Newborn stage (0-28 days) Carnegie stage 16 Eighth decade stage Prime adult stage 11-year-old stage 6-year-old stage Young adult stage 10-year-old stage Carnegie stage 18 4-year-old stage 11th week post-fertilization stage

Gastric cancer Colorectal cancer Ulcerative colitis Normal Crohn disease

Female Male

10x 3' v1 10x 5' v2 10x 5' transcription profiling 10x 3' v3 10x 3' v2

Cell

Homo sapiens

Podocyte Endothelial cell Kidney interstitial fibroblast Blood vessel smooth muscle cell Kidney collecting duct intercalated cell Leukocyte Macrophage Kidney distal convoluted tubule epithelial cell Kidney granular cell Kidney collecting duct principal cell Kidney loop of henle thick ascending limb epithelial cell Macula densa epithelial cell Mesangial cell Kidney proximal convoluted tubule epithelial cell

Cortex of kidney

53-year-old stage

Normal

Male

Slide-seqv2

Mus musculus

Mast cell

Embryo

Theiler stage 22 Theiler stage 27 Theiler stage 24 Theiler stage 18 Theiler stage 25 Theiler stage 17 Theiler stage 19 Theiler stage 26 Theiler stage 20 Theiler stage 21 Theiler stage 23

Normal

Female Male

Sci-rna-seq3

Nucleus

Homo sapiens

T cell Central nervous system macrophage Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Amygdala excitatory neuron Committed oligodendrocyte precursor Lamp5 lhx6 neuron Eccentric medium spiny neuron Pvalb chandelier gabaergic interneuron Medial ganglionic eminence derived interneuron Microglial cell Pericyte Cerebral cortex neuron Near-projecting glutamatergic cortical neuron Neuron Intratelencephalic-projecting glutamatergic cortical neuron Caudal ganglionic eminence derived interneuron Vascular associated smooth muscle cell Sst chodl gabaergic interneuron Astrocyte Fibroblast Medium spiny neuron

Perirhinal cortex

42-year-old stage 29-year-old stage 50-year-old stage

Normal

Male

10x 3' v3

Nucleus

Mus musculus

Neuron

Spinal cord

3-6 month-old mature stage

Spinal cord injury Normal

Female

10x 3' v2

Nucleus

Homo sapiens

Adipocyte of breast Endothelial cell of lymphatic vessel Mammary gland epithelial cell Luminal epithelial cell of mammary gland Endothelial cell of vascular tree B cell Pericyte Fibroblast

Breast

Adult stage Prime adult stage

Normal

Female

Visium spatial gene expression v1

Homo sapiens

Podocyte Endothelial cell Kidney interstitial fibroblast Blood vessel smooth muscle cell Kidney collecting duct intercalated cell Leukocyte Macrophage Kidney distal convoluted tubule epithelial cell Kidney granular cell Kidney collecting duct principal cell Kidney loop of henle thick ascending limb epithelial cell Macula densa epithelial cell Mesangial cell Kidney proximal convoluted tubule epithelial cell

Cortex of kidney

50-year-old stage

Normal

Male

Slide-seqv2

Homo sapiens

Regular atrial cardiac myocyte

Right cardiac atrium Left cardiac atrium

Sixth decade stage Fifth decade stage Seventh decade stage Eighth decade stage

Normal

Female Male

10x 3' v3 10x 3' v2

Nucleus

Mus musculus

Cardiac valve cell Spinal cord interneuron Premigratory neural crest cell Paraxial cell Notochordal cell Neuroplacodal cell Hemangioblast Mesodermal cell Gut endothelial cell Primitive red blood cell Splanchnic mesodermal cell Surface ectodermal cell Midbrain dopaminergic neuron Endodermal cell

Embryo

Theiler stage 14

Normal

Slide-seqv2

Homo sapiens

Intestine goblet cell Best4+ enterocyte Paneth cell Epithelial cell Enteroendocrine cell Intestinal crypt stem cell Tuft cell of small intestine Enterocyte Mucous neck cell of gastric gland Foveolar cell of stomach Colonocyte M cell of gut

Duodenum Small intestine Ileum Intestine

19th week post-fertilization stage 21st week post-fertilization stage 15th week post-fertilization stage 17th week post-fertilization stage 12th week post-fertilization stage 16th week post-fertilization stage 18th week post-fertilization stage 2-month-old stage Newborn stage (0-28 days)

Normal

Female Male

10x 5' v2 10x 3' v2

Cell

Homo sapiens

Midbrain-derived inhibitory neuron T cell Central nervous system macrophage Natural killer cell Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Amygdala excitatory neuron Committed oligodendrocyte precursor Cerebellar granule cell Cerebellar inhibitory gabaergic interneuron Ependymal cell Microglial cell Choroid plexus epithelial cell Bergmann glial cell Pericyte Neuron Monocyte Intratelencephalic-projecting glutamatergic cortical neuron Caudal ganglionic eminence derived interneuron Purkinje cell Vascular associated smooth muscle cell Astrocyte Unipolar brush cell Fibroblast

Pontine tegmentum

42-year-old stage 29-year-old stage 50-year-old stage

Normal

Male

10x 3' v3

Nucleus