Mus musculus

Kidney loop of henle thick ascending limb epithelial cell Kidney interstitial fibroblast Leukocyte Kidney proximal convoluted tubule epithelial cell Macula densa epithelial cell Podocyte Kidney collecting duct principal cell Macrophage Blood vessel smooth muscle cell Endothelial cell Kidney collecting duct intercalated cell Mesangial cell Kidney granular cell Kidney distal convoluted tubule epithelial cell

Kidney

6-month-old stage

Normal

Male

Slide-seqv2

Mus musculus

Kidney loop of henle thick ascending limb epithelial cell Kidney interstitial fibroblast Leukocyte Kidney proximal convoluted tubule epithelial cell Macula densa epithelial cell Podocyte Kidney collecting duct principal cell Macrophage Blood vessel smooth muscle cell Endothelial cell Kidney collecting duct intercalated cell Mesangial cell Kidney granular cell Kidney distal convoluted tubule epithelial cell

Kidney

6-month-old stage

Autosomal dominant polycystic kidney disease

Male

Slide-seqv2

Homo sapiens

Natural killer cell Dendritic cell T cell Macrophage Lymphocyte of b lineage Myeloid cell

Pleural effusion

Adult stage

Luminal b breast carcinoma Triple-negative breast carcinoma Luminal a breast carcinoma

10x 3' v3

Cell

Mus musculus

Oligodendrocyte Astrocyte Leptomeningeal cell Pericyte Smooth muscle cell Macrophage Gabaergic neuron Endothelial cell Glutamatergic neuron

Frontal cortex Primary visual cortex

11-week-old stage 8-week-old stage 10-week-old stage 12-week-old stage 9-week-old stage 7-week-old stage

Normal

Female Male

Smart-seq v4

Cell

Homo sapiens

Microglial cell Oligodendrocyte precursor cell Progenitor cell Forebrain neuroblast Glioblast Gabaergic neuron Erythrocyte Cajal-retzius cell Glutamatergic neuron Radial glial cell

Telencephalon

10th week post-fertilization stage

Normal

10x 3' v3

Cell

Mus musculus

Oligodendrocyte Astrocyte Microglial cell Oligodendrocyte precursor cell Brain microvascular endothelial cell Dopaminergic neuron

Normal

10x 3' v2

Homo sapiens

Subcutaneous adipocyte Mesenchymal stem cell of adipose tissue

Subcutaneous adipose tissue

34-year-old stage 24-year-old stage 33-year-old stage 41-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Plasmacytoid dendritic cell Natural killer cell Hepatocyte Hepatic stellate cell T cell B cell Non-classical monocyte Neutrophil Classical monocyte Monocyte Mature nk t cell Cd4-positive, alpha-beta t cell Macrophage Myeloid dendritic cell Intermediate monocyte Cd8-positive, alpha-beta t cell Erythrocyte Endothelial cell Intrahepatic cholangiocyte Hematopoietic precursor cell Fibroblast Plasma cell Mast cell Myeloid cell

Liver

59-year-old stage 60-year-old stage 36-year-old stage 67-year-old stage

Normal

Female Male

Smart-seq2 10x 3' v3

Cell

Homo sapiens

Hepatocyte T cell Malignant cell Macrophage Blood vessel smooth muscle cell Blood vessel endothelial cell Fibroblast

Liver

63-year-old stage

Breast cancer

Female

Slide-seqv2

Homo sapiens

Sncg gabaergic interneuron

Middle temporal gyrus

68-year-old stage 88-year-old stage 86-year-old stage 82-year-old stage 83-year-old stage 60-year-old stage 75-year-old stage 80-year-old stage 77-year-old stage Adult stage 89-year-old stage 78-year-old stage 72-year-old stage 80 year-old and over stage 81-year-old stage 87-year-old stage 84-year-old stage 65-year-old stage 85-year-old stage 50-year-old stage 29-year-old stage 69-year-old stage 70-year-old stage

Dementia Normal

Female Male

10x multiome 10x 3' v3

Nucleus

Mus musculus

Kidney loop of henle thick ascending limb epithelial cell Kidney interstitial fibroblast Leukocyte Kidney proximal convoluted tubule epithelial cell Kidney collecting duct principal cell Macrophage Blood vessel smooth muscle cell Endothelial cell Kidney collecting duct intercalated cell Kidney distal convoluted tubule epithelial cell

Kidney

6-month-old stage

Autosomal dominant polycystic kidney disease

Male

Slide-seqv2

Homo sapiens

Astrocyte Microglial cell Mueller cell Endothelial cell

Fovea centralis Peripheral region of retina

64-year-old stage 60-year-old stage 74-year-old stage 78-year-old stage 65-year-old stage 53-year-old stage 69-year-old stage

Normal

Female Male

10x 3' v2 10x 3' v3

Cell