Homo sapiens

Kidney loop of henle thick ascending limb epithelial cell Kidney interstitial fibroblast Leukocyte Kidney proximal convoluted tubule epithelial cell Macula densa epithelial cell Podocyte Kidney collecting duct principal cell Macrophage Blood vessel smooth muscle cell Endothelial cell Kidney collecting duct intercalated cell Mesangial cell Kidney granular cell Kidney distal convoluted tubule epithelial cell

Cortex of kidney

53-year-old stage

Normal

Male

Slide-seqv2

Mus musculus

Mast cell

Embryo

Theiler stage 21 Theiler stage 27 Theiler stage 20 Theiler stage 26 Theiler stage 23 Theiler stage 19 Theiler stage 22 Theiler stage 24 Theiler stage 18 Theiler stage 17 Theiler stage 25

Normal

Female Male

Sci-rna-seq3

Nucleus

Homo sapiens

Oligodendrocyte Astrocyte T cell Medial ganglionic eminence derived interneuron Pvalb chandelier gabaergic interneuron Microglial cell Oligodendrocyte precursor cell Neuron Pericyte Committed oligodendrocyte precursor Eccentric medium spiny neuron Cerebral cortex neuron Intratelencephalic-projecting glutamatergic cortical neuron Vascular associated smooth muscle cell Sst chodl gabaergic interneuron Endothelial cell Amygdala excitatory neuron Caudal ganglionic eminence derived interneuron Medium spiny neuron Central nervous system macrophage Fibroblast Lamp5 lhx6 neuron Near-projecting glutamatergic cortical neuron

Perirhinal cortex

42-year-old stage 50-year-old stage 29-year-old stage

Normal

Male

10x 3' v3

Nucleus

Mus musculus

Neuron

Spinal cord

3-6 month-old mature stage

Normal Spinal cord injury

Female

10x 3' v2

Nucleus

Homo sapiens

Mammary gland epithelial cell Adipocyte of breast B cell Pericyte Endothelial cell of lymphatic vessel Endothelial cell of vascular tree Luminal epithelial cell of mammary gland Fibroblast

Breast

Adult stage Prime adult stage

Normal

Female

Visium spatial gene expression v1

Homo sapiens

Kidney loop of henle thick ascending limb epithelial cell Kidney interstitial fibroblast Leukocyte Kidney proximal convoluted tubule epithelial cell Macula densa epithelial cell Podocyte Kidney collecting duct principal cell Macrophage Blood vessel smooth muscle cell Endothelial cell Kidney collecting duct intercalated cell Mesangial cell Kidney granular cell Kidney distal convoluted tubule epithelial cell

Cortex of kidney

50-year-old stage

Normal

Male

Slide-seqv2

Homo sapiens

Regular atrial cardiac myocyte

Left cardiac atrium Right cardiac atrium

Seventh decade stage Fifth decade stage Sixth decade stage Eighth decade stage

Normal

Female Male

10x 3' v2 10x 3' v3

Nucleus

Mus musculus

Notochordal cell Spinal cord interneuron Paraxial cell Gut endothelial cell Splanchnic mesodermal cell Hemangioblast Cardiac valve cell Endodermal cell Primitive red blood cell Midbrain dopaminergic neuron Premigratory neural crest cell Mesodermal cell Neuroplacodal cell Surface ectodermal cell

Embryo

Theiler stage 14

Normal

Slide-seqv2

Homo sapiens

M cell of gut Intestine goblet cell Enterocyte Mucous neck cell of gastric gland Colonocyte Paneth cell Enteroendocrine cell Best4+ enterocyte Foveolar cell of stomach Tuft cell of small intestine Epithelial cell Intestinal crypt stem cell

Intestine Small intestine Duodenum Ileum

16th week post-fertilization stage 2-month-old stage 21st week post-fertilization stage 15th week post-fertilization stage 19th week post-fertilization stage 12th week post-fertilization stage 18th week post-fertilization stage 17th week post-fertilization stage Newborn stage (0-28 days)

Normal

Female Male

10x 5' v2 10x 3' v2

Cell

Homo sapiens

Oligodendrocyte Natural killer cell Astrocyte Purkinje cell Bergmann glial cell T cell Microglial cell Oligodendrocyte precursor cell Neuron Ependymal cell Pericyte Committed oligodendrocyte precursor Monocyte Cerebellar inhibitory gabaergic interneuron Cerebellar granule cell Intratelencephalic-projecting glutamatergic cortical neuron Vascular associated smooth muscle cell Endothelial cell Amygdala excitatory neuron Caudal ganglionic eminence derived interneuron Choroid plexus epithelial cell Central nervous system macrophage Midbrain-derived inhibitory neuron Fibroblast Unipolar brush cell

Pontine tegmentum

42-year-old stage 50-year-old stage 29-year-old stage

Normal

Male

10x 3' v3

Nucleus

Homo sapiens

Plasmacytoid dendritic cell Axl+ dendritic cell, human Cd141-positive myeloid dendritic cell Cd1c-positive myeloid dendritic cell

Blood

62-year-old stage 32-year-old stage 31-year-old stage 34-year-old stage 30-year-old stage 59-year-old stage 64-year-old stage 25-year-old stage 56-year-old stage 55-year-old stage 11-year-old stage 57-year-old stage 28-year-old stage 33-year-old stage 60-year-old stage 35-year-old stage 63-year-old stage 61-year-old stage 26-year-old stage 27-year-old stage 36-year-old stage 12-year-old stage 58-year-old stage 65-year-old stage 29-year-old stage

Normal Cytomegalovirus infection

Female Male

10x 3' v3

Cell

Mus musculus

Kidney loop of henle thick ascending limb epithelial cell Kidney interstitial fibroblast Leukocyte Kidney proximal convoluted tubule epithelial cell Macula densa epithelial cell Podocyte Kidney collecting duct principal cell Macrophage Blood vessel smooth muscle cell Endothelial cell Kidney collecting duct intercalated cell Mesangial cell Kidney granular cell Kidney distal convoluted tubule epithelial cell

Kidney

6-month-old stage

Autosomal dominant polycystic kidney disease

Male

Slide-seqv2