Homo sapiens

Oligodendrocyte

White matter of parietal lobe Prefrontal cortex White matter of frontal lobe White matter of occipital lobe White matter of temporal lobe

68-year-old stage 82-year-old stage 83-year-old stage 76-year-old stage 72-year-old stage 81-year-old stage 53-year-old stage 70-year-old stage

Alzheimer disease Leukoencephalopathy, diffuse hereditary, with spheroids 1 Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Oligodendrocyte Natural killer cell Astrocyte T cell Medial ganglionic eminence derived interneuron Pvalb chandelier gabaergic interneuron Microglial cell Oligodendrocyte precursor cell B cell Neuron Ependymal cell Pericyte Committed oligodendrocyte precursor Monocyte Eccentric medium spiny neuron Cerebellar inhibitory gabaergic interneuron Cerebral cortex neuron Cerebellar granule cell Intratelencephalic-projecting glutamatergic cortical neuron Vascular associated smooth muscle cell Endothelial cell Caudal ganglionic eminence derived interneuron Thalamic excitatory neuron Central nervous system macrophage Midbrain-derived inhibitory neuron Fibroblast Lamp5 lhx6 neuron

Epithalamus

42-year-old stage 29-year-old stage

Normal

Male

10x 3' v3

Nucleus

Homo sapiens

Natural killer cell Myoepithelial cell Basal-myoepithelial cell of mammary gland T cell Regulatory t cell B cell Cd8-positive, alpha-beta cytotoxic t cell Mature nk t cell Perivascular cell Cd4-positive, alpha-beta t cell T follicular helper cell Luminal epithelial cell of mammary gland Endothelial cell Plasma cell Myeloid cell Fibroblast of breast

Mammary gland connective tissue

49-year-old stage 35-year-old stage 67-year-old stage 47-year-old stage 73-year-old stage

Triple-negative breast carcinoma

Female

10x 3' v2

Cell

Homo sapiens

Oligodendrocyte Natural killer cell Astrocyte Bergmann glial cell T cell Microglial cell Oligodendrocyte precursor cell Neuron Ependymal cell Pericyte Committed oligodendrocyte precursor Monocyte Cerebellar inhibitory gabaergic interneuron Cerebellar granule cell Intratelencephalic-projecting glutamatergic cortical neuron Vascular associated smooth muscle cell Endothelial cell Caudal ganglionic eminence derived interneuron Choroid plexus epithelial cell Central nervous system macrophage Midbrain-derived inhibitory neuron Fibroblast

Spinal cord

50-year-old stage

Normal

Male

10x 3' v3

Nucleus

Mus musculus

Astrocyte Contractile cell Neuron associated cell Neuroblast (sensu vertebrata) Microglial cell Neural cell Ependymal cell Vascular leptomeningeal cell (mmus) Gabaergic neuron Central nervous system neuron Endothelial cell Neural progenitor cell Neural stem cell

Postnatal subventricular zone

4-week-old stage

Normal

Mixed sex

10x genomics v3

Homo sapiens

Oligodendrocyte Natural killer cell Astrocyte Purkinje cell Bergmann glial cell T cell Medial ganglionic eminence derived interneuron Microglial cell Oligodendrocyte precursor cell B cell Neuron Ependymal cell Pericyte Committed oligodendrocyte precursor Monocyte Cerebellar inhibitory gabaergic interneuron Cerebellar granule cell Intratelencephalic-projecting glutamatergic cortical neuron Vascular associated smooth muscle cell Endothelial cell Amygdala excitatory neuron Caudal ganglionic eminence derived interneuron Central nervous system macrophage Midbrain-derived inhibitory neuron Fibroblast Unipolar brush cell

Parabrachial nucleus

42-year-old stage 50-year-old stage 29-year-old stage

Normal

Male

10x 3' v3

Nucleus

Homo sapiens

Natural killer cell Regulatory t cell Hair follicular keratinocyte Basal cell of epidermis Pericyte Fibroblast of papillary layer of dermis Endothelial cell of lymphatic vessel Monocyte Macrophage Erythrocyte Granular cell of epidermis Endothelial cell Suprabasal keratinocyte Dendritic cell, human Spinous cell of epidermis Helper t cell Fibroblast Langerhans cell Melanocyte of skin Skin fibroblast Cytotoxic t cell

Skin of body

32-year-old stage 28-year-old stage 60-year-old stage 47-year-old stage 23-year-old stage

Psoriasis Normal

Female Male

10x 3' v3

Cell

Homo sapiens

Erythroid lineage cell Fibroblast

Hindgut Colon Ileum

10th week post-fertilization stage 14th week post-fertilization stage 16th week post-fertilization stage 11th week post-fertilization stage 21st week post-fertilization stage Carnegie stage 22 23rd week post-fertilization stage 19th week post-fertilization stage 13th week post-fertilization stage 18th week post-fertilization stage 17th week post-fertilization stage

Normal

Female Male

10x 3' v3

Cell

Homo sapiens

Cd14-low, cd16-positive monocyte Naive thymus-derived cd4-positive, alpha-beta t cell Regular atrial cardiac myocyte Atrioventricular bundle cell B cell Endothelial cell of artery Regular ventricular cardiac myocyte Glial cell Pericyte Endothelial cell of lymphatic vessel Neutrophil Monocyte Cd8-positive, alpha-beta cytotoxic t cell Smooth muscle cell Macrophage Fibroblast of cardiac tissue Adipocyte Smooth muscle cell of the pulmonary artery Endothelial cell Cd14-positive monocyte Dendritic cell, human Capillary endothelial cell Endocardial cell Vein endothelial cell Plasma cell Mast cell Mucosal invariant t cell Cardiac pacemaker cell of sinoatrial node Cd16-positive, cd56-dim natural killer cell, human

Atrioventricular node

Fifth decade stage Sixth decade stage Eighth decade stage

Normal

Female Male

Visium spatial gene expression v1

Homo sapiens

Dendritic cell Monocyte Mast cell

Right ovary Left ovary Intestine Parietal peritoneum Abdomen Caecum Paracolic gutter Liver Omentum Ascitic fluid Lymph node Large intestine Abdominal wall Diaphragm Fallopian tube Peritoneum Urinary bladder Transverse colon Adnexa of uterus

66-year-old stage 59-year-old stage 64-year-old stage 46-year-old stage 56-year-old stage 68-year-old stage 55-year-old stage 57-year-old stage 60-year-old stage 75-year-old stage 77-year-old stage 63-year-old stage 76-year-old stage 61-year-old stage 78-year-old stage 80 year-old and over stage 47-year-old stage 58-year-old stage 50-year-old stage 45-year-old stage 69-year-old stage 70-year-old stage 41-year-old stage 71-year-old stage

Malignant ovarian serous tumor

Female

10x 3' v3

Cell

Homo sapiens

Kidney loop of henle thick ascending limb epithelial cell Kidney interstitial fibroblast Leukocyte Kidney proximal convoluted tubule epithelial cell Kidney collecting duct principal cell Macrophage Blood vessel smooth muscle cell Endothelial cell Kidney collecting duct intercalated cell Kidney distal convoluted tubule epithelial cell

Renal medulla

50-year-old stage

Normal

Male

Slide-seqv2

Homo sapiens

Neuroblast (sensu vertebrata) Motor neuron Afferent neuron Inhibitory motor neuron Enteric neuron Enteroglial cell Interneuron

Ascending colon Stomach Intestine Colon Caecum Labial gland Descending colon Gingiva Sigmoid colon Small intestine Pylorus Mesenteric lymph node Periodontium Jejunum Rectosigmoid junction Duodenum Esophagus Pyloric antrum Colonic mucosa Buccal mucosa Body of stomach Transverse colon Ileum Rectum

62-year-old stage 66-year-old stage 31-year-old stage 54-year-old stage 10th week post-fertilization stage 30-year-old stage 9th week post-fertilization stage 59-year-old stage 16th week post-fertilization stage 11th week post-fertilization stage 14-year-old stage 56-year-old stage Seventh decade stage 24-year-old stage 55-year-old stage Carnegie stage 16 86-year-old stage 2-month-old stage 11-year-old stage 4-year-old stage 57-year-old stage 28-year-old stage 15th week post-fertilization stage 33-year-old stage 60-year-old stage Carnegie stage 22 35-year-old stage 77-year-old stage 26-year-old stage 6-year-old stage 13-year-old stage Young adult stage 9-year-old stage Prime adult stage 67-year-old stage Sixth decade stage 81-year-old stage 12-year-old stage 52-year-old stage 44-year-old stage 10-year-old stage Eighth decade stage 22-year-old stage 84-year-old stage Carnegie stage 17 65-year-old stage 23-year-old stage 19th week post-fertilization stage 85-year-old stage Carnegie stage 18 Third decade stage Carnegie stage 19 50-year-old stage 45-year-old stage 13th week post-fertilization stage 29-year-old stage 12th week post-fertilization stage Embryonic stage 51-year-old stage 18th week post-fertilization stage 17th week post-fertilization stage Newborn stage (0-28 days)

Ulcerative colitis Crohn disease Colorectal cancer Gastric cancer Normal

Female Male

10x 5' v2 10x 3' v2 10x 5' transcription profiling 10x 3' v3 10x 3' v1

Cell