Callithrix jacchus

Astrocyte

Putamen Ventral thalamus Cerebellum lobule Posterior hypothalamic region Secondary visual cortex Hippocampal formation Lateral geniculate body Primary somatosensory cortex Lateral nuclear group of thalamus Brodmann (1909) area 23 Temporal cortex Central amygdaloid nucleus Dorsal thalamus Medial amygdaloid nucleus Primary auditory cortex Dorsolateral prefrontal cortex Thalamic complex Temporal lobe Brodmann (1909) area 25 Parietal cortex Primary motor cortex Amygdala Primary visual cortex Lateral amygdaloid nucleus Anterior hypothalamic region Ventral lateral nucleus of thalamus Caudate nucleus Medial dorsal nucleus of thalamus Nucleus accumbens Basal forebrain Brainstem Prefrontal cortex

Prime adult stage Late adult stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Innate lymphoid cell Cd16-negative, cd56-bright natural killer cell, human Natural killer cell Cd16-positive, cd56-dim natural killer cell, human

Blood

32-year-old stage 57-year-old stage 62-year-old stage 60-year-old stage 64-year-old stage 25-year-old stage 33-year-old stage 65-year-old stage 27-year-old stage 28-year-old stage 36-year-old stage 63-year-old stage 59-year-old stage 31-year-old stage 56-year-old stage 58-year-old stage 61-year-old stage 34-year-old stage 35-year-old stage 30-year-old stage 26-year-old stage 12-year-old stage 29-year-old stage 55-year-old stage 11-year-old stage

Normal Cytomegalovirus infection

Female Male

10x 3' v3

Cell

Homo sapiens

L2/3-6 intratelencephalic projecting glutamatergic neuron Caudal ganglionic eminence derived interneuron Cerebral cortex endothelial cell Vascular leptomeningeal cell Oligodendrocyte precursor cell Oligodendrocyte Astrocyte of the cerebral cortex Sncg gabaergic interneuron Near-projecting glutamatergic cortical neuron Sst gabaergic interneuron Microglial cell Lamp5 gabaergic interneuron L6b glutamatergic cortical neuron Corticothalamic-projecting glutamatergic cortical neuron L5 extratelencephalic projecting glutamatergic cortical neuron Vip gabaergic interneuron Pvalb gabaergic interneuron Pvalb chandelier gabaergic interneuron

Middle temporal gyrus

50-year-old stage 60-year-old stage 42-year-old stage 43-year-old stage 29-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Mus musculus

Vascular leptomeningeal cell Astrocyte Oligodendrocyte precursor cell Lymphocyte Smooth muscle cell of the brain vasculature Microglial cell Ependymal cell Pericyte Brain microvascular endothelial cell Perivascular macrophage Neuron

Normal Prion disease

10x 3' transcription profiling

Mus musculus

Type 6 cone bipolar cell (sensu mus) Type 3b cone bipolar cell Type 9 cone bipolar cell (sensu mus) Type 5b cone bipolar cell Type 4 cone bipolar cell (sensu mus) Type 8 cone bipolar cell (sensu mus) Type 2 cone bipolar cell (sensu mus) Type 3a cone bipolar cell Type 5 cone bipolar cell (sensu mus) Type 1 cone bipolar cell (sensu mus) Type 5a cone bipolar cell Type 7 cone bipolar cell (sensu mus) Rod bipolar cell

Retina

12-week-old stage 4-month-old stage 7-week-old stage 5-week-old stage 25-week-old stage 2-week-old stage 9-week-old stage 8-week-old stage 11-week-old stage

Normal

Male

10x 3' v3 Drop-seq 10x 3' v2

Cell

Mus musculus

Type 6 cone bipolar cell (sensu mus) Type 3b cone bipolar cell Type 9 cone bipolar cell (sensu mus) Type 5b cone bipolar cell Type 4 cone bipolar cell (sensu mus) Type 8 cone bipolar cell (sensu mus) Type 2 cone bipolar cell (sensu mus) Type 3a cone bipolar cell Type 5 cone bipolar cell (sensu mus) Type 1 cone bipolar cell (sensu mus) Type 5a cone bipolar cell Type 7 cone bipolar cell (sensu mus) Rod bipolar cell

Normal

10x 3' v3 Drop-seq 10x 3' v2

Homo sapiens

Schwann cell Endothelial cell of lymphatic vessel Lymphocyte Myelinating schwann cell Epithelial cell Conjunctiva goblet cell Keratocyte Progenitor cell Fibroblast Blood vessel endothelial cell Pericyte Endothelial cell Myeloid leukocyte Corneal endothelial cell Conjunctival epithelial cell Smooth muscle cell Melanocyte

Sclera Cornea Corneo-scleral junction

66-year-old stage 70-year-old stage 50-year-old stage 57-year-old stage 62-year-old stage 46-year-old stage 60-year-old stage 44-year-old stage 33-year-old stage 65-year-old stage 71-year-old stage 47-year-old stage 58-year-old stage 72-year-old stage 30-year-old stage 24-year-old stage 69-year-old stage 83-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Macrophage Mast cell Epithelial cell Neutrophil Fibroblast Endothelial cell B cell Dendritic cell Plasma cell Erythrocyte T cell

Axilla Adrenal gland Liver Lung Brain Pleural effusion Bone spine Lymph node

80-year-old stage 85-year-old stage 82-year-old stage 79-year-old stage 70-year-old stage 77-year-old stage 57-year-old stage 76-year-old stage 62-year-old stage 44-year-old stage 64-year-old stage 74-year-old stage 65-year-old stage 67-year-old stage 75-year-old stage 71-year-old stage 78-year-old stage 47-year-old stage 68-year-old stage 72-year-old stage 73-year-old stage 84-year-old stage 69-year-old stage 81-year-old stage 55-year-old stage

Small cell lung carcinoma Normal Lung adenocarcinoma

Female Male

10x 3' v3 10x 3' v2 10x 3' transcription profiling

Cell

Homo sapiens

Cultured cell

K-562

Normal

Sci-plex

Nucleus

Homo sapiens

Capillary endothelial cell Peptic cell Activated cd8-positive, alpha-beta t cell Igg plasma cell Natural t-regulatory cell Iga plasma cell Macrophage Mast cell Cd4-positive helper t cell Type g enteroendocrine cell Glandular cell of esophagus Stem cell Monocyte Enteroendocrine cell Memory t cell Vein endothelial cell Fibroblast Parietal cell Mucous neck cell of gastric gland Dendritic cell P/d1 enteroendocrine cell Erythrocyte Memory b cell Enterocyte Foveolar cell of stomach Natural killer cell Endothelial cell of artery Gamma-delta t cell Epithelial cell of esophagus Intestine goblet cell

Body of stomach Ileum Rectum Esophagogastric junction Submucosal esophageal gland Duodenum Colon Cardia of stomach Lower esophagus

66-year-old stage 77-year-old stage 50-year-old stage 57-year-old stage 62-year-old stage 60-year-old stage 80 year-old and over stage 48-year-old stage 45-year-old stage 74-year-old stage 67-year-old stage 27-year-old stage 63-year-old stage 54-year-old stage 56-year-old stage 58-year-old stage 68-year-old stage 34-year-old stage 51-year-old stage 42-year-old stage 53-year-old stage 69-year-old stage 43-year-old stage 29-year-old stage 41-year-old stage 55-year-old stage 83-year-old stage

Normal Barrett esophagus Gastric intestinal metaplasia Gastritis

Female Male

10x 3' v3 10x 3' v2

Cell

Oryctolagus cuniculus

Primordial germ cell Obsolete somatic cell Mononuclear cytotrophoblast cell Endodermal cell Ectodermal cell Mesothelial cell of epicardium Epithelial cell of thyroid gland Neural crest cell Embryonic cell (metazoa) Mesothelial cell Endocardial cell Syncytiotrophoblast cell Paraxial cell Mesodermal cell Epithelial cell Trophoblast cell Megakaryocyte-erythroid progenitor cell Erythroid lineage cell Amniocyte Progenitor cell Vein endothelial cell Cns neuron (sensu vertebrata) Migratory neural crest cell Epiblast cell Endothelial cell Bone marrow hematopoietic cell Mesenchymal cell Neurecto-epithelial cell Lateral mesodermal cell Notochordal cell Fetal cardiomyocyte Surface ectodermal cell Neuron Extraembryonic cell

Embryo Extraembryonic tissue Conceptus Yolk sac

Embryo stage

Normal

Mixed sex

10x genomics v3

Homo sapiens

Oligodendrocyte

Dorsolateral prefrontal cortex

80-year-old stage 85-year-old stage 82-year-old stage 70-year-old stage 77-year-old stage 50-year-old stage 86-year-old stage 80 year-old and over stage 89-year-old stage 75-year-old stage 78-year-old stage 68-year-old stage 42-year-old stage 72-year-old stage 88-year-old stage 84-year-old stage 69-year-old stage 29-year-old stage 87-year-old stage 81-year-old stage 83-year-old stage

Normal Dementia

Female Male

10x 3' v3 10x multiome

Nucleus