Homo sapiens

Cardiac muscle cell

Apex of heart Heart left ventricle Heart right ventricle Interventricular septum

Pediatric stage Sixth decade stage Fifth decade stage Third decade stage Seventh decade stage Postnatal stage Fourth decade stage Eighth decade stage

Arrhythmogenic right ventricular cardiomyopathy Dilated cardiomyopathy Normal Non-compaction cardiomyopathy

Female Male

10x 3' v3 10x 3' v2

Nucleus

Mus musculus

Myotube Muscle precursor cell Myoblast Myofibroblast cell

Embryo

Theiler stage 22 Theiler stage 27 Theiler stage 24 Theiler stage 18 Theiler stage 25 Theiler stage 14 Theiler stage 16 Theiler stage 17 Theiler stage 15 Theiler stage 19 Theiler stage 26 Theiler stage 13 Theiler stage 20 Theiler stage 12 Theiler stage 21 Theiler stage 23

Normal

Female Male

Sci-rna-seq3

Nucleus

Homo sapiens

T cell Neutrophil Podocyte Parietal epithelial cell Kidney interstitial alternatively activated macrophage Renal interstitial pericyte Endothelial cell Kidney loop of henle thin descending limb epithelial cell Mature nk t cell Kidney interstitial fibroblast Mast cell Kidney collecting duct intercalated cell Epithelial cell of proximal tubule Plasmacytoid dendritic cell, human Neural cell Kidney distal convoluted tubule epithelial cell Kidney collecting duct principal cell Kidney connecting tubule epithelial cell Kidney loop of henle thick ascending limb epithelial cell Plasma cell B cell Kidney loop of henle thin ascending limb epithelial cell Papillary tips cell Conventional dendritic cell Non-classical monocyte Mononuclear phagocyte

Cortex of kidney Kidney Renal medulla Renal papilla

66-year-old stage 69-year-old stage Sixth decade stage 54-year-old stage 29-year-old stage Fifth decade stage 57-year-old stage Third decade stage 14-year-old stage Seventh decade stage 59-year-old stage 45-year-old stage Fourth decade stage 63-year-old stage Eighth decade stage 76-year-old stage

Chronic kidney disease Normal Acute kidney failure

Female Male

10x 3' v3

Nucleus

Homo sapiens

T cell Neutrophil Podocyte Parietal epithelial cell Kidney interstitial alternatively activated macrophage Renal interstitial pericyte Endothelial cell Kidney loop of henle thin descending limb epithelial cell Kidney interstitial fibroblast Mast cell Kidney collecting duct intercalated cell Epithelial cell of proximal tubule Plasmacytoid dendritic cell, human Neural cell Lymphocyte Kidney distal convoluted tubule epithelial cell Kidney collecting duct principal cell Kidney connecting tubule epithelial cell Kidney loop of henle thick ascending limb epithelial cell Plasma cell B cell Kidney loop of henle thin ascending limb epithelial cell Papillary tips cell Conventional dendritic cell Non-classical monocyte Mononuclear phagocyte

Cortex of kidney Kidney Renal medulla Renal papilla

66-year-old stage 69-year-old stage 42-year-old stage 43-year-old stage Sixth decade stage 53-year-old stage 52-year-old stage 54-year-old stage 48-year-old stage 30-year-old stage 39-year-old stage 29-year-old stage 56-year-old stage Fifth decade stage 57-year-old stage Third decade stage 49-year-old stage 14-year-old stage 35-year-old stage Seventh decade stage 59-year-old stage 64-year-old stage 45-year-old stage 41-year-old stage 70-year-old stage 31-year-old stage 36-year-old stage Fourth decade stage 63-year-old stage Eighth decade stage 47-year-old stage 76-year-old stage 40-year-old stage

Chronic kidney disease Normal Acute kidney failure

Female Male

10x 3' v3

Nucleus Cell

Mus musculus

Cell Endothelial cell Pancreatic acinar cell Pancreatic pp cell Schwann cell Pancreatic endocrine cell Pancreatic a cell Pancreatic d cell Pancreatic stellate cell Type b pancreatic cell Pancreatic ductal cell Hematopoietic cell

Islet of langerhans Pancreas

6-month-old stage 5-week-old stage Theiler stage 22 4-month-old stage 3-month-old stage 20-month-old stage and over 2-week-old stage Theiler stage 20 2-month-old stage Theiler stage 21 Theiler stage 23 8-week-old stage

Type 1 diabetes mellitus Endocrine pancreas disorder Normal Type 2 diabetes mellitus

Female Male

10x 3' v3 10x 3' v2

Cell

Danio rerio

Peridermal cell Ionocyte Epidermal cell Epidermal mucus secreting cell

Cloaca Ectoderm-derived structure Head Integument Multicellular anatomical structure Periderm Skin epidermis Taste bud

Pharyngula:prim-15 Hatching:long-pec Larval:protruding-mouth Pharyngula:prim-25 Segmentation:26+ somites Segmentation:14-19 somites Hatching:pec-fin Segmentation:20-25 somites Pharyngula:high-pec Pharyngula:prim-5

Normal

Sci-rna-seq3

Nucleus

Homo sapiens

Intestine goblet cell Natural killer cell Erythrocyte Gamma-delta t cell Type g enteroendocrine cell Mast cell Iga plasma cell Cd4-positive helper t cell Stem cell Natural t-regulatory cell Endothelial cell of artery Capillary endothelial cell Peptic cell Igg plasma cell P/d1 enteroendocrine cell Enteroendocrine cell Glandular cell of esophagus Macrophage Memory b cell Activated cd8-positive, alpha-beta t cell Parietal cell Enterocyte Vein endothelial cell Mucous neck cell of gastric gland Foveolar cell of stomach Monocyte Fibroblast Dendritic cell Memory t cell Epithelial cell of esophagus

Body of stomach Cardia of stomach Colon Duodenum Esophagogastric junction Ileum Lower esophagus Rectum Submucosal esophageal gland

66-year-old stage 69-year-old stage 34-year-old stage 65-year-old stage 42-year-old stage 43-year-old stage 71-year-old stage 53-year-old stage 88-year-old stage 54-year-old stage 68-year-old stage 48-year-old stage 29-year-old stage 56-year-old stage 55-year-old stage 84-year-old stage 82-year-old stage 50-year-old stage 80-year-old stage 51-year-old stage 57-year-old stage 74-year-old stage 80 year-old and over stage 58-year-old stage 67-year-old stage 77-year-old stage 64-year-old stage 45-year-old stage 62-year-old stage 86-year-old stage 41-year-old stage 70-year-old stage 60-year-old stage 36-year-old stage 63-year-old stage 73-year-old stage 83-year-old stage 27-year-old stage

Gastric cancer Barrett esophagus Normal Gastric intestinal metaplasia Gastritis

Female Male

10x 5' v1 10x 3' v3 10x 3' v2

Cell

Homo sapiens

Cultured cell

Mcf-7

Normal

Sci-plex

Nucleus

Sus scrofa Macaca mulatta Homo sapiens

T cell Pyramidal neuron Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Endothelial cell of artery Leukocyte Dentate gyrus neuron Neural cell Brain vascular cell Hippocampal granule cell Macrophage Microglial cell Granule cell Neuroblast (sensu vertebrata) Myeloid cell Pericyte Neuron Vascular associated smooth muscle cell Astrocyte Hippocampal astrocyte

Ammon's horn Dentate gyrus of hippocampal formation Entorhinal cortex Subiculum Ca1 field of hippocampus Hippocampal field

48-year-old stage 44-year-old stage 50-year-old stage 51-year-old stage 79-year-old stage

Normal

Female Male

10x genomics v3

Homo sapiens

Neuron Sst chodl gabaergic interneuron

Brodmann (1909) area 13 Brodmann (1909) area 14 Brodmann (1909) area 19 Brodmann (1909) area 23 Brodmann (1909) area 24 Brodmann (1909) area 25 Brodmann (1909) area 32 Brodmann (1909) area 38 Brodmann (1909) area 40 Brodmann (1909) area 43 Brodmann (1909) area 46 Accessory basal amygdaloid nucleus Agranular insular cortex Anterior cortical amygdaloid nucleus Anterior nuclear group Anterior olfactory nucleus Basolateral amygdaloid nuclear complex Bed nucleus of stria terminalis Body of caudate nucleus Central amygdaloid nucleus Centromedian nucleus of thalamus Cerebellar nuclear complex Cerebellar vermis Cerebrocerebellum Claustrum of brain Corticomedial nuclear complex Cuneus cortex Dentate gyrus of hippocampal formation Dorsal tegmental nucleus Epithalamus Extrastriate cortex Globus pallidus Granular insular cortex Gray matter of midbrain Hippocampal field Hypothalamus Inferior frontal gyrus Inferior olivary complex Inferior temporal gyrus Intralaminar nuclear group Lateral amygdaloid nucleus Lateral entorhinal cortex Lateral geniculate body Lateral nuclear group of thalamus Lateral posterior nucleus of thalamus Mammillary body Medial dorsal nucleus of thalamus Medial entorhinal cortex Medial geniculate body Medial zone of hypothalamus Median tuberal portion Midbrain nucleus Midbrain tectum Middle temporal gyrus Nucleus accumbens Nucleus of dorsal thalamus Nucleus of medulla oblongata Parabrachial nucleus Perirhinal cortex Piriform cortex Pontine nuclear group Pontine reticular formation Pontine tegmentum Posterior parahippocampal gyrus Preoptic area Pretectal region Primary auditory cortex Primary motor cortex Primary somatosensory cortex Primary visual cortex Pulvinar nucleus Putamen Red nucleus Retrosplenial region Rostral ca3 Septal nuclear complex Spinal cord Subicular complex Substantia innominata Substantia nigra Subthalamic nucleus Superior parietal cortex Superior temporal gyrus Supraoptic nucleus Temporal fusiform gyrus Uncal ca1 Ventral anterior nucleus of thalamus

42-year-old stage 29-year-old stage 50-year-old stage 60-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Mus musculus

Hepatocyte

Embryo

Theiler stage 22 Theiler stage 27 Theiler stage 24 Theiler stage 18 Theiler stage 25 Theiler stage 14 Theiler stage 16 Theiler stage 17 Theiler stage 15 Theiler stage 19 Theiler stage 26 Theiler stage 13 Theiler stage 20 Theiler stage 21 Theiler stage 23

Normal

Female Male

Sci-rna-seq3

Nucleus

Homo sapiens

Neuroblast (sensu vertebrata)

Basal forebrain Brain Caudate-putamen Cerebellar peduncular complex Cerebellum Cerebral subcortex Choroid plexus epithelium Cortex Diencephalon Dorsal plus ventral thalamus Entorhinal cortex Forebrain Frontal cortex Head Hindbrain Hippocampal formation Hypothalamus Lower layers of the cortex Medulla oblongata Metencephalon Midbrain Midbrain tectum Occipital cortex Pons Striatum Telencephalon Upper layers of the cortex

13th week post-fertilization stage 14th week post-fertilization stage 15th week post-fertilization stage 12th week post-fertilization stage Carnegie stage 20 9th week post-fertilization stage 10th week post-fertilization stage Carnegie stage 22 Carnegie stage 16 Carnegie stage 15 Carnegie stage 18 11th week post-fertilization stage

Normal

10x 3' v3 10x 3' v2

Cell