scFAIR

Homo sapiens (1469)

Homo sapiens

Mus musculus (497)

Mus musculus

Mus musculus musculus (2)

Mus musculus musculus

Drosophila melanogaster (49)

Drosophila melanogaster

Danio rerio (31)

Danio rerio

Callithrix jacchus (27)

Callithrix jacchus

Macaca mulatta (23)

Macaca mulatta

Macaca fascicularis (5)

Macaca fascicularis

Rattus norvegicus (4)

Rattus norvegicus

Oryctolagus cuniculus (2)

Oryctolagus cuniculus

Pan troglodytes (2)

Pan troglodytes

Sus scrofa (2)

Sus scrofa

Sus scrofa domesticus (1)

Sus scrofa domesticus

Gallus gallus (1)

Gallus gallus

Gorilla gorilla (1)

Gorilla gorilla

Heterocephalus glaber (1)

Heterocephalus glaber

Monodelphis domestica (1)

Monodelphis domestica

Ornithorhynchus anatinus (1)

Ornithorhynchus anatinus

A2 amacrine cell

B cell

B cell zone reticular cell

B-1 b cell

B-1a b cell

B-1b b cell

B-2 b cell

Best4+ enterocyte

Bergmann glial cell

Cchamide-1 neuron

Cd103-positive dendritic cell

Cd11b-positive dendritic cell

Cd14-low, cd16-positive monocyte

Cd14-positive monocyte

Cd14-positive, cd16-low monocyte

Cd14-positive, cd16-negative classical monocyte

Cd14-positive, cd16-positive monocyte

Cd141-positive myeloid dendritic cell

Cd16-negative, cd56-bright natural killer cell, human

Cd16-positive, cd56-dim natural killer cell, human

Cd1c-positive myeloid dendritic cell

Cd22-positive, cd38-low small pre-b cell

Cd34-negative, cd117-positive innate lymphoid cell, human

Cd34-positive, cd38-negative hematopoietic stem cell

Cd34-positive, cd56-positive, cd117-positive common innate lymphoid precursor, human

Cd38-negative naive b cell

Cd4-negative, cd8-negative, alpha-beta intraepithelial t cell

Cd4-positive helper t cell

Cd4-positive, cd25-positive, alpha-beta regulatory t cell

Cd4-positive, cd8-intermediate double-positive thymocyte

Cd4-positive, alpha-beta t cell

Cd4-positive, alpha-beta cytotoxic t cell

Cd4-positive, alpha-beta memory t cell

Cd4-positive, alpha-beta memory t cell, cd45ro-positive

Cd4-positive, alpha-beta thymocyte

Cd56-positive, cd161-positive immature natural killer cell, human

Cd8-alpha alpha positive, gamma-delta intraepithelial t cell

Cd8-alpha-alpha-positive, alpha-beta intraepithelial t cell

Cd8-alpha-beta-positive, alpha-beta intraepithelial t cell

Cd8-alpha-positive cd11b-negative dendritic cell

Cd8-positive, cd28-negative, alpha-beta regulatory t cell

Cd8-positive, alpha-beta t cell

Cd8-positive, alpha-beta cytotoxic t cell

Cd8-positive, alpha-beta memory t cell

Cd8-positive, alpha-beta memory t cell, cd45ro-positive

Cd8-positive, alpha-beta regulatory t cell

Cd8-positive, alpha-beta thymocyte

Cns neuron (sensu vertebrata)

Cns surface glial cell

Cajal-retzius cell

Dn1 neuron

Dn3 thymocyte

Dn4 thymocyte

Gabaergic amacrine cell

Gabaergic interneuron

Gabaergic neuron

Gip cell

H1 horizontal cell

H2 horizontal cell

Hofbauer cell

Ilc1, human

Itp neuron

Iga plasma cell

Iga plasmablast

Igg memory b cell

Igg plasma cell

Igg plasmablast

Igg-negative class switched memory b cell

Igm plasma cell

Igm plasmablast

Johnston organ neuron

Kenyon cell

Kolmer-agduhr neuron

Kupffer cell

L2/3 intratelencephalic projecting glutamatergic neuron

L2/3 intratelencephalic projecting glutamatergic neuron of the primary motor cortex

L2/3-6 intratelencephalic projecting glutamatergic neuron

L3 intratelencephalic projecting glutamatergic neuron

L4 intratelencephalic projecting glutamatergic neuron

L4/5 intratelencephalic projecting glutamatergic neuron

L4/5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex

L5 extratelencephalic projecting glutamatergic cortical neuron

L5 intratelencephalic projecting glutamatergic neuron

L5/6 near-projecting glutamatergic neuron

L5/6 near-projecting glutamatergic neuron of the primary motor cortex

L6 corticothalamic-projecting glutamatergic cortical neuron

L6 intratelencephalic projecting glutamatergic neuron

L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex

L6b glutamatergic cortical neuron

L6b glutamatergic neuron of the primary motor cortex

Lnv neuron

Langerhans cell

Leydig cell

M cell of gut

Mhc-ii-positive classical monocyte

Malpighian tubule

Malpighian tubule type i cell

Merkel cell

Mueller cell

Nkp44-negative group 3 innate lymphoid cell, human

Nkp44-positive group 3 innate lymphoid cell, human

Nkp46-positive innate lymphoid cell, human

Off midget ganglion cell

Off parasol ganglion cell

Off retinal ganglion cell

Off-bipolar cell

Offx cell

On midget ganglion cell

On parasol ganglion cell

On retinal ganglion cell

On-bipolar cell

On-blue cone bipolar cell

P/d1 enteroendocrine cell

Pp cell

Purkinje cell

Rohon-beard neuron

S cone cell

Schwann cell

Schwann cell precursor

Sertoli cell

T cell

T follicular helper cell

T follicular regulatory cell

T neuron

T-helper 1 cell

T-helper 17 cell

T-helper 2 cell

T-helper 22 cell

T2 neuron

T2a neuron

T3 neuron

T4 neuron

T4a neuron

T4b neuron

T4c neuron

T4d neuron

T5 neuron

T5a neuron

T5b neuron

T5c neuron

T5d neuron

Tc1 cell

Vip gabaergic cortical interneuron

Abnormal cell

Acinar cell

Acinar cell of salivary gland

Activated cd4-negative, cd8-negative type i nk t cell

Activated cd4-positive, alpha-beta t cell

Activated cd4-positive, alpha-beta t cell, human

Activated cd8-positive, alpha-beta t cell

Activated cd8-positive, alpha-beta t cell, human

Activated type ii nk t cell

Adaxial cell

Adipocyte

Adipocyte of breast

Adipocyte of epicardial fat of left ventricle

Adipocyte of omentum tissue

Adipose macrophage

Adult ccap neuron

Adult capability neuron

Adult hugin neuron

Adult kenyon cell

Adult malpighian tubule

Adult malpighian tubule bar-shaped cell of initial segment

Adult malpighian tubule principal cell

Adult malpighian tubule principal cell of initial segment

Adult malpighian tubule principal cell of lower segment

Adult malpighian tubule principal cell of lower ureter

Adult malpighian tubule principal cell of main segment

Adult malpighian tubule principal cell of transitional segment

Adult malpighian tubule stellate cell of main segment

Adult abdominal pericardial cell

Adult adipose system

Adult alary muscle cell

Adult antennal lobe projection neuron adpn

Adult antennal olfactory receptor neuron

Adult anterior midgut class i enteroendocrine cell

Adult anterior midgut class ii enteroendocrine cell

Adult astrocyte-like glial cell

Adult brain cell body glial cell

Adult brain perineurial glial cell

Adult cholinergic neuron

Adult class i enteroendocrine cell

Adult class iii enteroendocrine cell

Adult corazonin neuron

Adult differentiating enterocyte

Adult dopaminergic pam neuron

Adult dopaminergic neuron

Adult ensheathing glial cell

Adult enterocyte

Adult enteroendocrine cell

Adult enteroendocrine precursor cell

Adult epidermis

Adult esophagus

Adult fat body

Adult gamma kenyon cell

Adult glial cell

Adult heart

Adult heart ventral longitudinal muscle cell

Adult hindgut

Adult hindgut epithelium

Adult insulin secreting cell of pars intercerebralis

Adult lamina epithelial glial cell

Adult lamina marginal glial cell

Adult lobula astrocyte-like glial cell

Adult middle midgut class i enteroendocrine cell

Adult middle midgut class ii enteroendocrine cell

Adult midgut enterocyte

Adult midgut-hindgut hybrid zone

Adult muscle system

Adult mushroom body output neuron

Adult myoinhibitory peptide neuron

Adult neuron

Adult octopaminergic neuron

Adult oenocyte

Adult olfactory projection neuron

Adult olfactory receptor neuron gr21a/63a

Adult olfactory receptor neuron ir75d

Adult olfactory receptor neuron or13a

Adult olfactory receptor neuron or47b

Adult olfactory receptor neuron or65

Adult olfactory receptor neuron or67d

Adult olfactory receptor neuron or88a

Adult olfactory receptor neuron or92a

Adult optic chiasma glial cell

Adult optic lobe neuron

Adult ostial pore

Adult peptidergic neuron

Adult pericardial cell

Adult pericerebral fat mass

Adult peripheral nervous system

Adult plasmatocyte

Adult posterior midgut class i enteroendocrine cell

Adult posterior midgut class ii enteroendocrine cell

Adult pylorus

Adult renal stem cell

Adult salivary gland

Adult serotonergic neuron

Adult skeletal muscle myoblast

Adult somatic muscle cell

Adult somatic muscle cell of head

Adult tracheal section

Adult tracheocyte

Adult tyraminergic neuron

Adult ventral nerve cord

Adventitial cell

Adventitial fibroblast

Airway submucosal gland collecting duct epithelial cell

Airway submucosal gland duct basal cell

Alpha'/beta' kenyon cell

Alpha-beta t cell

Alpha/beta kenyon cell

Alternatively activated macrophage

Alveolar adventitial fibroblast

Alveolar capillary type 1 endothelial cell

Alveolar capillary type 2 endothelial cell

Alveolar macrophage

Alveolar type 1 fibroblast cell

Amacrine cell

Amniocyte

Amygdala excitatory neuron

Antennal lobe projection neuron

Antennal olfactory receptor neuron of basiconic sensillum

Antennal olfactory receptor neuron of coeloconic sensillum

Antennal trichoid sensillum at4

Anterior ejaculatory duct

Anterior lens cell

Anterior visceral endoderm cell

Antibody secreting cell

Aortic endothelial cell

Aortic smooth muscle cell

Apoptosis fated cell

Arachnoid barrier cell

Articular chondrocyte

Ascending mechanosensory neuron of leg chordotonal organ

Astrocyte

Astrocyte of the cerebellum

Astrocyte of the cerebral cortex

Astrocyte-like glial cell

Atrioventricular bundle cell

Auditory epithelial cell

Auditory epithelial supporting cell

Auditory sensory neuron

Basal cell

Basal cell of epidermis

Basal cell of epithelium of bronchus

Basal cell of epithelium of lobular bronchiole

Basal cell of epithelium of trachea

Basal cell of olfactory epithelium

Basal cell of prostate epithelium

Basal cell of urothelium

Basal epithelial cell of prostatic duct

Basal epithelial cell of tracheobronchial tree

Basal-myoepithelial cell of mammary gland

Basket cell

Basophil

Basophil mast progenitor cell

Basophilic erythroblast

Bipolar neuron

Bistratified retinal ganglion cell

Bitter-sensitive labellar taste bristle

Bladder cell

Bladder urothelial cell

Blastoderm cell

Blood cell

Blood vessel endothelial cell

Blood vessel smooth muscle cell

Bone marrow cell

Bone marrow hematopoietic cell

Brain microvascular endothelial cell

Brain pericyte

Brain vascular cell

Brainstem motor neuron

Bronchial epithelial cell

Bronchial goblet cell

Bronchial smooth muscle cell

Bronchiolar smooth muscle cell

Bronchus fibroblast of lung

Brown adipocyte

Brown preadipocyte

Brush cell

Brush cell of bronchus

Brush cell of epithelium proper of large intestine

Brush cell of trachea

Brush cell of tracheobronchial tree

Calvarial osteoblast

Capillary endothelial cell

Cardiac atrium fibroblast

Cardiac blood vessel endothelial cell

Cardiac endothelial cell

Cardiac mesenchymal cell

Cardiac muscle cell

Cardiac muscle myoblast

Cardiac neuron

Cardiac pacemaker cell of sinoatrial node

Cardiac valve cell

Cardiac ventricle fibroblast

Cardial cell

Caudal ganglionic eminence derived cortical interneuron

Cell

Cell body glial cell

Cell in vitro

Cell of skeletal muscle

Central memory cd4-positive, alpha-beta t cell

Central memory cd8-positive, alpha-beta t cell

Central nervous system macrophage

Central nervous system neuron

Centrifugal neuron c2

Centrifugal neuron c3

Centrilobular region hepatocyte

Centroblast

Centrocyte

Cerebellar golgi cell

Cerebellar granule cell

Cerebellar granule cell precursor

Cerebellar neuron

Cerebellum glutamatergic neuron

Cerebral cortex gabaergic interneuron

Cerebral cortex endothelial cell

Cerebral cortex neuron

Cerebral cortex pyramidal neuron

Chandelier cell

Chandelier pvalb gabaergic cortical interneuron

Cholangiocyte

Cholinergic neuron

Chondroblast

Chondrocyte

Chordotonal neuron

Chordotonal organ of leg

Chorionic trophoblast cell

Choroid plexus epithelial cell

Choroid plexus macrophage

Choroidal melanocyte

Chromaffin cell

Ciliary muscle cell

Ciliated cell

Ciliated epithelial cell

Class switched memory b cell

Classical monocyte

Club cell

Cochlea auditory hair cell

Collagen secreting cell

Colon endothelial cell

Colon epithelial cell

Colon glandular cell

Colon goblet cell

Colon macrophage

Colonocyte

Columnar neuron t1

Columnar/cuboidal epithelial cell

Committed oligodendrocyte precursor

Common dendritic progenitor

Common lymphoid progenitor

Common myeloid progenitor

Compound eye cone cell

Cone cell

Cone retinal bipolar cell

Conjunctiva goblet cell

Conjunctival epithelial cell

Connective tissue cell

Contractile cell

Conventional dendritic cell

Copper cell

Cord blood hematopoietic stem cell

Corneal endothelial cell

Corneal epithelial cell

Cortical cell of adrenal gland

Cortical interneuron

Cortical thymic epithelial cell

Corticomedullary thymic epithelial cell

Corticothalamic-projecting glutamatergic cortical neuron

Cranial motor neuron

Crop

Crystal cell

Cultured cell

Cycling b cell

Cycling t cell

Cycling dendritic cell

Cycling macrophage

Cycling myeloid cell

Cycling plasma cell

Cyst cell of testis

Cyst progenitor cell

Cytotoxic t cell

Decidual cell

Decidual natural killer cell, human

Dendritic cell

Dendritic cell, human

Dentate gyrus neuron

Dermis microvascular lymphatic vessel endothelial cell

Detection of pheromone

Deuterosomal cell

Diffuse bipolar 1 cell

Diffuse bipolar 2 cell

Diffuse bipolar 3a cell

Diffuse bipolar 3b cell

Diffuse bipolar 4 cell

Diffuse bipolar 4a cell

Diffuse bipolar 4b cell

Diffuse bipolar 5 cell

Diffuse bipolar 6 cell

Direct pathway medium spiny neuron

Distal convoluted tubule

Distal medullary amacrine neuron

Distal medullary amacrine neuron dm10

Distal medullary amacrine neuron dm11

Distal medullary amacrine neuron dm12

Distal medullary amacrine neuron dm3

Distal medullary amacrine neuron dm8

Distal medullary amacrine neuron dm9

Dopaminergic neuron

Dorsal appendage forming follicle cell

Dorsal diaphragm

Dorsal margin photoreceptor cell

Dorsal rim area

Double negative t regulatory cell

Double negative thymocyte

Double-positive blast

Double-positive, alpha-beta thymocyte

Duct epithelial cell

Early t lineage precursor

Early elongation stage spermatid

Early lymphoid progenitor

Early pro-b cell

Early promyelocyte

Early spermatid

Early-mid elongation-stage spermatid

Ectodermal cell

Effector cd4-positive, alpha-beta t cell

Effector cd8-positive, alpha-beta t cell

Effector t cell

Effector memory cd4-positive, alpha-beta t cell

Effector memory cd4-positive, alpha-beta t cell, terminally differentiated

Effector memory cd8-positive, alpha-beta t cell

Effector memory cd8-positive, alpha-beta t cell, terminally differentiated

Efferent neuron

Ejaculatory bulb

Elicited macrophage

Embryonic blood vessel endothelial progenitor cell

Embryonic cell (metazoa)

Embryonic fibroblast

Embryonic stem cell

Embryonic/larval crystal cell

Embryonic/larval fat body

Endo-epithelial cell

Endocardial cell

Endocrine cell

Endodermal cell

Endosteal cell

Endothelial cell

Endothelial cell of arteriole

Endothelial cell of artery

Endothelial cell of coronary artery

Endothelial cell of hepatic portal vein

Endothelial cell of hepatic sinusoid

Endothelial cell of high endothelial venule

Endothelial cell of lymphatic vessel

Endothelial cell of pericentral hepatic sinusoid

Endothelial cell of periportal hepatic sinusoid

Endothelial cell of placenta

Endothelial cell of respiratory system lymphatic vessel

Endothelial cell of sinusoid

Endothelial cell of umbilical vein

Endothelial cell of uterus

Endothelial cell of vascular tree

Endothelial cell of venule

Endothelial stalk cell

Endothelial tip cell

Endothelium

Ensheathing glial cell

Enteric neuron

Enteric smooth muscle cell

Enteroblast

Enterochromaffin-like cell

Enterocyte

Enterocyte of anterior adult midgut epithelium

Enterocyte of epithelium of large intestine

Enterocyte of epithelium of small intestine

Enterocyte of epithelium proper of duodenum

Enterocyte of epithelium proper of ileum

Enterocyte of epithelium proper of jejunum

Enterocyte of epithelium proper of large intestine

Enterocyte of epithelium proper of small intestine

Enterocyte of posterior adult midgut epithelium

Enteroendocrine cell

Enteroendocrine cell of colon

Enteroendocrine cell of small intestine

Enteroglial cell

Enucleate erythrocyte

Enucleated reticulocyte

Eo sensory organ accessory cell

Eosinophil

Ependymal cell

Epiblast cell

Epicardial adipocyte

Epidermal langerhans cell

Epidermal cell

Epidermal mucus secreting cell

Epidermis

Epithelial cell

Epithelial cell of amnion

Epithelial cell of distal tubule

Epithelial cell of early distal convoluted tubule

Epithelial cell of esophagus

Epithelial cell of exocrine pancreas

Epithelial cell of glomerular capsule

Epithelial cell of large intestine

Epithelial cell of lower respiratory tract

Epithelial cell of lung

Epithelial cell of nephron

Epithelial cell of pancreas

Epithelial cell of parathyroid gland

Epithelial cell of prostate

Epithelial cell of proximal tubule

Epithelial cell of proximal tubule segment 1

Epithelial cell of proximal tubule segment 2

Epithelial cell of proximal tubule segment 3

Epithelial cell of small intestine

Epithelial cell of stomach

Epithelial cell of stratum germinativum of esophagus

Epithelial cell of sweat gland

Epithelial cell of thymus

Epithelial cell of thyroid gland

Epithelial cell of urethra

Epithelial cell of uterus

Epithelial fate stem cell

Epithelium

Erythroblast

Erythrocyte

Erythroid lineage cell

Erythroid progenitor cell

Erythroid progenitor cell, mammalian

Escort cell

Eukaryotic cell

Eurydendroid cell

Excretory system

Exhausted t cell

Exocrine cell

Extracellular matrix secreting cell

Extraembryonic cell

Extrafusal muscle fiber

Extratelencephalic-projecting glutamatergic cortical neuron

Extravillous trophoblast

Eye

Eye photoreceptor cell

Fallopian tube multiciliated cell

Fallopian tube secretory epithelial cell

Fast muscle cell

Fast muscle myoblast

Fat body

Fat body cell

Fat cell

Female germ cell

Female germline cell

Female reproductive system

Fenestrated endothelial cell

Fetal cardiomyocyte

Fibro/adipogenic progenitor cell

Fibroblast

Fibroblast of breast

Fibroblast of cardiac tissue

Fibroblast of choroid plexus

Fibroblast of connective tissue of glandular part of prostate

Fibroblast of connective tissue of nonglandular part of prostate

Fibroblast of connective tissue of prostate

Fibroblast of dermis

Fibroblast of lung

Fibroblast of lymphatic vessel

Fibroblast of mammary gland

Fibroblast of the aortic adventitia

Fibrocyte

Flat midget bipolar cell

Follicle cell

Follicle cell of egg chamber

Follicular b cell

Follicular dendritic cell

Forebrain neuroblast

Forebrain radial glial cell

Foveolar cell of stomach

Fraction a pre-pro b cell

Gamma kenyon cell

Gamma-delta t cell

Gamma-delta thymocyte

Ganglion interneuron

Gastrointestinal tract (lamina propria) macrophage of large intestine

Germ cell

Germarium

Germinal center b cell

Germinal center t cell

Germinal proliferation center hub

Germline cell

Giant bipolar cell

Gingival epithelial cell

Gland

Glandular cell of esophagus

Glandular secretory epithelial cell

Glial cell

Glioblast

Glioblast (sensu vertebrata)

Glomerular capillary endothelial cell

Glomerular endothelial cell

Glomerular mesangial cell

Glutamatergic neuron

Glycinergic amacrine cell

Glycinergic neuron

Goblet cell

Granular cell of epidermis

Granule cell

Granulocyte

Granulocyte monocyte progenitor cell

Granulocytopoietic cell

Granulosa cell

Gravity sensitive johnston organ neuron

Group 1 innate lymphoid cell

Group 2 innate lymphoid cell

Group 2 innate lymphoid cell, human

Group 3 innate lymphoid cell

Group 3 innate lymphoid cell, human

Gustatory receptor neuron

Gustatory receptor neuron of the labellum

Gut absorptive cell

Gut endothelial cell

Hair follicle cell

Hair follicle melanocyte

Hair follicular keratinocyte

Hatching gland cell

Head

Head cyst cell

Head segment

Helper t cell

Hemangioblast

Hematopoietic cell

Hematopoietic multipotent progenitor cell

Hematopoietic oligopotent progenitor cell

Hematopoietic precursor cell

Hematopoietic stem cell

Hemocyte

Hemocyte (sensu arthropoda)

Hepatic pit cell

Hepatic portal fibroblast

Hepatic stellate cell

Hepatoblast

Hepatocyte

Hindgut

Hippocampal ca1-3 neuron

Hippocampal astrocyte

Hippocampal granule cell

Hippocampal interneuron

Hippocampal neuron

Hippocampal pyramidal neuron

Histaminergic neuron

Hypendymal cell

Hypertrophic chondrocyte

Hypothalamus cell

Ileal goblet cell

Immature

Immature b cell

Immature nk t cell

Immature schwann cell

Immature t cell

Immature alpha-beta t cell

Immature astrocyte

Immature innate lymphoid cell

Immature natural killer cell

Immature neutrophil

Immature single positive thymocyte

Indirect flight muscle cell

Indirect pathway medium spiny neuron

Inflammatory cell

Inflammatory macrophage

Inhibitory interneuron

Inhibitory motor neuron

Innate lymphoid cell

Inner photoreceptor cell

Intercalated cell of salivary gland

Interfollicle cell

Intermediate cell of urothelium

Intermediate mesodermal cell

Intermediate monocyte

Intermediate muscle cell

Interneuron

Interommatidial cell

Interstitial cell

Interstitial cell of cajal

Interstitial cell of ovary

Intestinal crypt stem cell

Intestinal crypt stem cell of colon

Intestinal crypt stem cell of large intestine

Intestinal crypt stem cell of small intestine

Intestinal enteroendocrine cell

Intestinal epithelial cell

Intestinal stem cell

Intestinal tuft cell

Intestine goblet cell

Intraepithelial lymphocyte

Intrahepatic cholangiocyte

Intratelencephalic-projecting glutamatergic cortical neuron

Invaginating midget bipolar cell

Ionocyte

Iridophore

Iris pigment epithelial cell

Keratinizing barrier epithelial cell

Keratinocyte

Keratinocyte stem cell

Keratocyte

Kidney afferent arteriole endothelial cell

Kidney arterial blood vessel cell

Kidney capillary endothelial cell

Kidney cell

Kidney collecting duct alpha-intercalated cell

Kidney collecting duct cell

Kidney collecting duct epithelial cell

Kidney collecting duct intercalated cell

Kidney collecting duct principal cell

Kidney connecting tubule epithelial cell

Kidney connecting tubule principal cell

Kidney cortex artery cell

Kidney cortex collecting duct epithelial cell

Kidney cortex tubule cell

Kidney distal convoluted tubule epithelial cell

Kidney efferent arteriole endothelial cell

Kidney epithelial cell

Kidney glomerular epithelial cell

Kidney granular cell

Kidney inner medulla collecting duct epithelial cell

Kidney interstitial alternatively activated macrophage

Kidney interstitial cell

Kidney interstitial fibroblast

Kidney loop of henle ascending limb epithelial cell

Kidney loop of henle cortical thick ascending limb epithelial cell

Kidney loop of henle descending limb epithelial cell

Kidney loop of henle epithelial cell

Kidney loop of henle medullary thick ascending limb epithelial cell

Kidney loop of henle thick ascending limb epithelial cell

Kidney loop of henle thin ascending limb epithelial cell

Kidney loop of henle thin descending limb epithelial cell

Kidney outer medulla collecting duct intercalated cell

Kidney pelvis urothelial cell

Kidney proximal convoluted tubule epithelial cell

Kidney proximal straight tubule epithelial cell

Kidney resident macrophage

Kidney tubule cell

Labral sense organ mechanosensory neuron

Lactocyte

Lamellocyte

Lamina monopolar neuron

Lamina monopolar neuron l1

Lamina monopolar neuron l2

Lamina monopolar neuron l3

Lamina monopolar neuron l4

Lamina monopolar neuron l5

Lamina wide-field 1 neuron

Lamina wide-field 2 neuron

Lamp5 gabaergic cortical interneuron

Large intestine goblet cell

Large pre-b-ii cell

Larval optic neuroblast

Larval ventral nerve cord

Late pro-b cell

Late promyelocyte

Late spermatid

Lateral mesodermal cell

Lateral motor column neuron

Leg muscle motor neuron

Leg taste bristle chemosensory neuron

Lens epithelial cell

Lens fiber cell

Leptomeningeal cell

Leukocyte

Liver dendritic cell

Lobula columnar neuron lc10

Lobula columnar neuron lc12

Lobula columnar neuron lc17

Luminal adaptive secretory precursor cell of mammary gland

Luminal cell of lactiferous duct

Luminal cell of prostate epithelium

Luminal epithelial cell of mammary gland

Luminal hormone-sensing cell of mammary gland

Lung endothelial cell

Lung goblet cell

Lung interstitial macrophage

Lung macrophage

Lung megakaryocyte

Lung microvascular endothelial cell

Lung multiciliated epithelial cell

Lung perichondrial fibroblast

Lung pericyte

Lung resident memory cd4-positive, alpha-beta t cell

Lung resident memory cd8-positive, alpha-beta t cell

Lung secretory cell

Luteal cell

Lymph node lymphatic vessel endothelial cell

Lymph node macrophage

Lymphatic endothelial cell of medulla ceiling

Lymphatic endothelial cell of subcapsular sinus ceiling

Lymphatic endothelial cell of subcapsular sinus floor

Lymphocyte

Lymphocyte of b lineage

Lymphoid lineage restricted progenitor cell

Macroglial cell

Macrophage

Macrophage dendritic cell progenitor

Macula densa epithelial cell

Main body follicle cell

Male accessory gland

Male accessory gland main cell

Male accessory gland secondary cell

Male germ cell

Male germ line stem cell

Male germline cell

Male reproductive system

Malignant cell

Mammary gland epithelial cell

Mammary microvascular endothelial cell

Marginal zone b cell of spleen

Mast cell

Mature b cell

Mature cd4 single-positive thymocyte

Mature cd8 single-positive thymocyte

Mature nk t cell

Mature t cell

Mature alpha-beta t cell

Mature astrocyte

Mature conventional dendritic cell

Mature gamma-delta t cell

Mature microglial cell

Mature neutrophil

Maxillary palp

Maxillary palp olfactory receptor neuron

Mechanoreceptor cell

Mechanosensory neuron

Mechanosensory neuron of leg chordotonal organ

Medial antennal lobe tract projection neuron

Medial ganglionic eminence derived gabaergic cortical interneuron

Medial ganglionic eminence derived interneuron

Medium spiny neuron

Medullary intrinsic neuron mi1

Medullary intrinsic neuron mi15

Medullary intrinsic neuron mi4

Medullary intrinsic neuron mi9

Medullary tangential neuron mt1

Medullary tangential neuron mt2

Medullary tangential neuron mt3

Medullary thymic epithelial cell

Medullary thymic epithelial cell type 1

Medullary thymic epithelial cell type 2

Medullary thymic epithelial cell type 3

Megakaryocyte

Megakaryocyte progenitor cell

Megakaryocyte-erythroid progenitor cell

Meis2 expressing cortical gabaergic cell

Melanoblast

Melanocyte

Melanocyte of skin

Memory b cell

Memory t cell

Memory regulatory t cell

Meningeal macrophage

Mesangial cell

Mesenchymal cell

Mesenchymal lymphangioblast

Mesenchymal stem cell

Mesenchymal stem cell of adipose tissue

Mesenchyme condensation cell

Mesodermal cell

Mesonephric nephron tubule epithelial cell

Mesothelial cell

Mesothelial cell of dura mater

Mesothelial cell of epicardium

Mesothelial cell of pleura

Mesothelial cell of visceral pleura

Mesothelial fibroblast

Metallothionein-positive alveolar macrophage

Metamyelocyte

Metanephric mesenchyme stem cell

Metanephric nephron tubule epithelial cell

Microcirculation associated smooth muscle cell

Microfold cell of epithelium of small intestine

Microglial cell

Microvascular endothelial cell

Mid-late elongation-stage spermatid

Midbrain dopaminergic neuron

Middle midgut

Midget ganglion cell of retina

Midgut

Midgut large flat cell

Midzonal region hepatocyte

Migratory cranial neural crest cell

Migratory enteric neural crest cell

Migratory neural crest cell

Mitotic cell cycle

Molecular layer interneuron

Monocyte

Monocyte-derived dendritic cell

Mononuclear cell

Mononuclear cytotrophoblast cell

Mononuclear phagocyte

Motor neuron

Mucosa-associated lymphoid tissue macrophage

Mucosal invariant t cell

Mucosal type mast cell

Mucous cell of stomach

Mucous neck cell of gastric gland

Mucus secreting cell

Mucus secreting cell of bronchus submucosal gland

Mucus secreting cell of tracheobronchial tree submucosal gland

Multi fate stem cell

Multiciliated columnar cell of tracheobronchial tree

Multiciliated ependymal cell

Multiciliated epithelial cell

Multiciliated epithelial cell of the bronchus

Multidendritic neuron

Mural cell

Muscle cell

Muscle fibroblast

Muscle precursor cell

Myelinating schwann cell

Myelocyte

Myeloid cell

Myeloid dendritic cell

Myeloid dendritic cell, human

Myeloid leukocyte

Myeloid lineage restricted progenitor cell

Myeloid suppressor cell

Myo-medullary thymic epithelial cell

Myoblast

Myocyte of atrioventricular node

Myocyte of sinoatrial node

Myoepithelial cell

Myoepithelial cell of bronchus submucosal gland

Myofibroblast cell

Myometrial cell

Myotendinous junction nucleus

Myotube

Naive b cell

Naive t cell

Naive regulatory t cell

Naive thymus-derived cd4-positive, alpha-beta t cell

Naive thymus-derived cd8-positive, alpha-beta t cell

Nasal mucosa goblet cell

Natural t-regulatory cell

Natural killer cell

Near-projecting glutamatergic cortical neuron

Neoplastic cell

Nephron tubule epithelial cell

Neural cell

Neural crest cell

Neural crest derived fibroblast

Neural crest derived neuron

Neural progenitor cell

Neural stem cell

Neurecto-epithelial cell

Neurectodermal cell

Neuro-medullary thymic epithelial cell

Neuroblast (sensu nematoda and protostomia)

Neuroblast (sensu vertebrata)

Neuroendocrine cell

Neuroepithelial stem cell

Neuromast supporting cell

Neuromuscular junction nucleus

Neuron

Neuron associated cell

Neuron associated cell (sensu vertebrata)

Neuron of aristal sensillum

Neuron of the dorsal spinal cord

Neuron of the forebrain

Neuronal receptor cell

Neuronal-restricted precursor

Neuroplacodal cell

Neurosecretory neuron

Neutrophil

Neutrophil progenitor cell

Neutrophilic myeloblast

Nociceptive neuron

Non-classical monocyte

Non-myelinating schwann cell

Non-pigmented ciliary epithelial cell

Non-terminally differentiated cell

Nonkeratinized cell of epidermis

Noradrenergic cell

Notochordal cell

Notochordal sheath cell

Notochordal vacuole cell

Obsolete adult dorsal cluster neuron

Obsolete animal cell

Obsolete excitatory neuron

Obsolete inhibitory neuron

Obsolete male germ line stem cell (sensu vertebrata)

Obsolete neurosecretory neuron

Obsolete peripheral glial cell

Obsolete somatic cell

Ocellar retinula cell

Odontoblast

Oenocyte

Olfactory bulb tufted cell

Olfactory ensheathing cell

Olfactory epithelial cell

Olfactory receptor cell

Olfactory receptor neuron

Oligodendrocyte

Oligodendrocyte precursor cell

Onychocyte

Oocyte

Oogonial cell

Optic-lobe-associated cortex glial cell

Oral mucosa squamous cell

Orthochromatic erythroblast

Osteoblast

Osteoclast

Ostial pore

Outer photoreceptor cell

Ovarian sheath cell

Ovarian sheath muscle cell

Ovarian surface epithelial cell

Ovary

Oviduct

Pacemaker neuron

Pancreatic a cell

Pancreatic d cell

Pancreatic pp cell

Pancreatic acinar cell

Pancreatic ductal cell

Pancreatic endocrine cell

Pancreatic epsilon cell

Pancreatic stellate cell

Paneth cell

Paneth cell of colon

Paneth cell of epithelium of small intestine

Papillary tips cell

Parasol ganglion cell of retina

Parasympathetic neuron

Paraxial cell

Parietal cell

Parietal epithelial cell

Peg cell

Peptic cell

Peptidergic neuron

Pericyte

Peridermal cell

Perineurial cell

Perineurial glial cell

Perineurial glial sheath

Perineuronal satellite cell

Peripheral blood mononuclear cell

Peripheral nervous system

Peripheral nervous system neuron

Periportal region hepatocyte

Peritubular capillary endothelial cell

Peritubular myoid cell

Perivascular cell

Perivascular macrophage

Phagocyte

Pheromone-sensing neuron

Photoreceptor

Photoreceptor cell

Photoreceptor cell r7

Photoreceptor cell r8

Photoreceptor cell of bolwig organ

Pigment cell

Pigmented ciliary epithelial cell

Pigmented epithelial cell

Pinealocyte

Pituitary gland cell

Placental villous trophoblast

Plasma cell

Plasmablast

Plasmacytoid dendritic cell

Plasmacytoid dendritic cell, human

Plasmatocyte

Platelet

Pluripotent stem cell

Podocyte

Polar follicle cell

Polychromatophilic erythroblast

Posterior terminal follicle cell

Pre-b-i cell

Pre-conventional dendritic cell

Pre-natural killer cell

Pre-theca cell

Preadipocyte

Precursor b cell

Precursor cell

Premigratory neural crest cell

Preosteoblast

Prickle cell

Primary cultured cell

Primary neuron (sensu teleostei)

Primary pigment cell

Primary sensory neuron (sensu teleostei)

Primary spermatocyte

Primitive erythroid progenitor

Primitive red blood cell

Primordial germ cell

Pro-b cell

Pro-t cell

Proerythroblast

Professional antigen presenting cell

Progenitor cell

Progenitor cell of endocrine pancreas

Progenitor cell of mammary luminal epithelium

Promonocyte

Promyelocyte

Prostate gland microvascular endothelial cell

Prostate stromal cell

Proventriculus

Proximal convoluted tubule

Proximal medullary amacrine neuron

Proximal medullary amacrine neuron pm2

Proximal medullary amacrine neuron pm3

Proximal medullary amacrine neuron pm4

Proximal straight tubule

Pulmonary alveolar epithelial cell

Pulmonary alveolar type 1 cell

Pulmonary alveolar type 2 cell

Pulmonary artery endothelial cell

Pulmonary capillary endothelial cell

Pulmonary interstitial fibroblast

Pulmonary ionocyte

Pulmonary neuroendocrine cell

Pvalb gabaergic cortical interneuron

Pyramidal neuron

Radial glial cell

Regular atrial cardiac myocyte

Regular ventricular cardiac myocyte

Regulatory t cell

Renal alpha-intercalated cell

Renal beta-intercalated cell

Renal connecting tubule

Renal intercalated cell

Renal interstitial pericyte

Renal medullary fibroblast

Renal principal cell

Reproductive system

Respiratory basal cell

Respiratory tract epithelial cell

Respiratory tract goblet cell

Respiratory tract hillock cell

Respiratory tract multiciliated cell

Respiratory tract suprabasal cell

Reticular cell

Reticulocyte

Retina horizontal cell

Retinal astrocyte

Retinal bipolar neuron

Retinal blood vessel endothelial cell

Retinal cell

Retinal cone cell

Retinal ganglion cell

Retinal pigment epithelial cell

Retinal progenitor cell

Retinal rod cell

Rod bipolar cell

Salivary gland

Salivary gland cell

Salivary gland glandular cell

Sebaceous gland cell

Sebocyte

Secondary crest myofibroblast

Secondary lens fiber

Secondary lymphoid organ macrophage

Secretory cell

Seminal vesicle

Seminal vesicle glandular cell

Sensory hair cell

Sensory neuron

Sensory neuron of campaniform sensillum

Sensory neuron of dorsal root ganglion

Seromucus secreting cell

Serotonergic neuron

Serous cell of epithelium of bronchus

Serous cell of epithelium of lobular bronchiole

Serous cell of epithelium of trachea

Serous secreting cell

Serous secreting cell of bronchus submucosal gland

Simple columnar epithelial cell

Skeletal muscle fiber

Skeletal muscle fibroblast

Skeletal muscle myoblast

Skeletal muscle satellite cell

Skeletal muscle satellite stem cell

Skin fibroblast

Slow muscle cell

Slow muscle myoblast

Small bistratified retinal ganglion cell

Small intestine goblet cell

Small pre-b-ii cell

Smooth muscle cell

Smooth muscle cell of large intestine

Smooth muscle cell of prostate

Smooth muscle cell of small intestine

Smooth muscle cell of sphincter of pupil

Smooth muscle cell of the brain vasculature

Smooth muscle cell of the pulmonary artery

Smooth muscle cell of trachea

Smooth muscle fiber of ileum

Smooth muscle myoblast

Sncg gabaergic cortical interneuron

Somatic muscle cell

Somatic precursor cell

Somatic stem cell

Sperm

Spermatid

Spermatocyte

Spermatocyte cyst cell

Spermatocyte fusome

Spermatogonium

Spinal cord interneuron

Spinal cord motor neuron

Spinal cord radial glial cell

Spiral ganglion neuron

Splanchnic mesodermal cell

Splenic macrophage

Splenic red pulp macrophage

Squamous epithelial cell

Sst gabaergic cortical interneuron

Sst chodl gabaergic cortical interneuron

Stalk follicle cell

Starburst amacrine cell

Stellate neuron

Stem cell

Stem cell of epidermis

Stratified epithelial cell

Stratified squamous epithelial cell

Stretch follicle cell

Striated cell of salivary gland

Striosomal d1 medium spiny neuron

Stroma

Stromal cell

Stromal cell of bone marrow

Stromal cell of endometrium

Stromal cell of lamina propria of small intestine

Stromal cell of ovary

Stromal cell of pancreas

Subcutaneous adipocyte

Subperineurial glial cell

Sugar-sensing neuron of the adult brain

Supporting cell

Supporting cell of vestibular epithelium

Suppressor macrophage

Suprabasal keratinocyte

Surface ectodermal cell

Sustentacular cell

Sweat secreting cell

Sympathetic neuron

Syncytiotrophoblast cell

Tanycyte

Taste receptor cell

Tendon cell

Terminal epithelial cell of testis

Terminal epithelium of testis

Testis

Thalamic excitatory neuron

Theca cell

Thick ascending limb of loop of henle

Thymic conventional dendritic cell

Thymic fibroblast type 1

Thymic fibroblast type 2

Thymic macrophage

Thymocyte

Thyroid follicular cell

Tip cell

Tissue-resident macrophage

Tongue muscle cell

Tonsil germinal center b cell

Tormogen cell

Trabecular meshwork cell

Tracheal epithelial cell

Tracheal goblet cell

Tracheal section

Tracheal system

Tracheobronchial chondrocyte

Tracheobronchial goblet cell

Tracheobronchial serous cell

Tracheobronchial smooth muscle cell

Tracheolar cell

Transit amplifying cell

Transit amplifying cell of colon

Transit amplifying cell of small intestine

Transitional stage b cell

Transmedullary y neuron tmy14

Transmedullary y neuron tmy4

Transmedullary y neuron tmy5a

Transmedullary y neuron tmy8

Transmedullary neuron

Transmedullary neuron tm1

Transmedullary neuron tm2

Transmedullary neuron tm20

Transmedullary neuron tm29

Transmedullary neuron tm3

Transmedullary neuron tm4

Transmedullary neuron tm5

Transmedullary neuron tm5c

Transmedullary neuron tm9

Trigeminal neuron

Trophoblast cell

Trophoblast giant cell

Tuft cell of colon

Tuft cell of small intestine

Type 1 cone bipolar cell (sensu mus)

Type 2 cone bipolar cell (sensu mus)

Type 3a cone bipolar cell

Type 3b cone bipolar cell

Type 4 cone bipolar cell (sensu mus)

Type 5 cone bipolar cell (sensu mus)

Type 5a cone bipolar cell

Type 5b cone bipolar cell

Type 6 cone bipolar cell (sensu mus)

Type 7 cone bipolar cell (sensu mus)

Type 8 cone bipolar cell (sensu mus)

Type 9 cone bipolar cell (sensu mus)

Type a enteroendocrine cell

Type b pancreatic cell

Type d enteroendocrine cell

Type ec enteroendocrine cell

Type g enteroendocrine cell

Type i nk t cell

Type i cell of adrenal cortex

Type i enteroendocrine cell

Type i muscle cell

Type ii nk t cell

Type ii muscle cell

Type ii neuroblast

Type iia muscle cell

Type iib muscle cell

Type iix muscle cell

Type l enteroendocrine cell

Type n enteroendocrine cell

Type-6 epithelial cell of thymus

Umbrella cell of urothelium

Unipolar brush cell

Unswitched memory b cell

Ureter smooth muscle cell

Ureter urothelial cell

Ureteric bud cell

Urethra urothelial cell

Urothelial cell

Uterine smooth muscle cell

Uterus

Valve endothelial cell

Valve interstitial cell

Vasa recta ascending limb cell

Vasa recta cell

Vasa recta descending limb cell

Vascular associated smooth muscle cell

Vascular leptomeningeal cell

Vascular leptomeningeal cell (mmus)

Vascular lymphangioblast

Vein endothelial cell

Vein endothelial cell of respiratory system

Ventricular cardiac muscle cell

Vestibular dark cell

Visceral muscle cell

Visceromotor neuron

Visual pigment cell (sensu nematoda and protostomia)

Vomeronasal sensory neuron

White adipocyte

Xanthoblast

Xanthophore cell

Ammon's horn

B cell

Brodmann (1909) area 10

Brodmann (1909) area 17

Brodmann (1909) area 19

Brodmann (1909) area 23

Brodmann (1909) area 24

Brodmann (1909) area 25

Brodmann (1909) area 38

Brodmann (1909) area 4

Brodmann (1909) area 46

Brodmann (1909) area 7

Brodmann (1909) area 9

Ca1 field of hippocampus

Malpighian tubule

T cell

Abdomen

Abdominal aorta

Abdominal wall

Adenohypophysis

Adipose tissue

Adnexa of uterus

Adrenal gland

Adrenal tissue

Adult mammalian kidney

Adult midgut

Adult oenocyte

Agranular insular cortex

Alveolar sac

Alveolus of lung

Ampulla of fallopian tube

Amygdala

Angular gyrus

Antenna

Anterior cerebral artery

Anterior cingulate cortex

Anterior cingulate gyrus

Anterior hypothalamic region

Anterior lateral plate mesoderm

Anterior olfactory nucleus

Anterior part of tongue

Anterior segment of eyeball

Anterior wall of left ventricle

Aorta

Apex of heart

Apical region of left ventricle

Arch of aorta

Arcuate nucleus of hypothalamus

Arm skin

Artery

Arthropod fat body

Ascending aorta

Ascending colon

Ascitic fluid

Atrioventricular node

Auditory cortex

Autopod skin

Axilla

Barrel cortex

Basal forebrain

Basal ganglion

Basal zone of heart

Basolateral amygdaloid nuclear complex

Bed nucleus of stria terminalis

Biliary system

Bladder lumen

Bladder organ

Blastocyst

Blood

Blood island

Blood vessel endothelium

Body

Body of caudate nucleus

Body of stomach

Body proper

Body wall

Bone marrow

Bone spine

Brain

Brain gray matter

Brain meninx

Brain ventricle

Brain white matter

Brainstem

Breast

Bronchial epithelial cell

Bronchial mucosa

Bronchopulmonary lymph node

Bronchus

Brown adipose tissue

Brown preadipocyte

Buccal mucosa

Bulb of aorta

Bulbus arteriosus

Caecum

Caecum epithelium

Calcaneal tendon

Cardia of stomach

Cardiac atrium

Cardiac ventricle

Carina of trachea

Carotid artery segment

Caudal ganglionic eminence

Caudate lobe of liver

Caudate nucleus

Caudate-putamen

Cecum mucosa

Central amygdaloid nucleus

Central nucleus of inferior colliculus

Cerebellar cortex

Cerebellar hemisphere

Cerebellar peduncular complex

Cerebellar vermis

Cerebellum

Cerebellum lobule

Cerebellum vermis lobule

Cerebral cortex

Cerebral nuclei

Cerebral subcortex

Cerebrocerebellum

Cerebrospinal fluid

Cervical lymph node

Cervical spinal cord white matter

Chest

Chest wall

Chorionic villus

Chorioretinal region

Choroid plexus

Choroid plexus epithelium

Ciliary body

Cingulate cortex

Claustrum of brain

Cleithrum

Cloaca

Colon

Colonic epithelium

Colorectum

Common bile duct

Compound eye

Conceptus

Conjunctiva

Cornea

Corneal endothelium

Corneal epithelium

Corneo-scleral junction

Coronal suture

Coronary artery

Corpus

Corpus callosum

Corpuscles of stannius

Cortex

Cortex of kidney

Cortical layer ii/iii

Cortical layer v

Cortical layer vi

Cortical plate

Cortical subplate

Corticomedial nuclear complex

Cranial ganglion

Cranial nerve ii

Craniocervical muscle

Crista ampullaris

Cultured cell

Cuneus cortex

Cystic lymph node

Decidua

Decidua basalis

Dental pulp

Dentate gyrus of hippocampal formation

Dentate nucleus

Dermis

Descending aorta

Descending colon

Diaphragm

Diencephalon

Digestive tract

Distal tubule

Dorsal lateral plate region

Dorsal motor nucleus of vagus nerve

Dorsal plus ventral thalamus

Dorsal root ganglion

Dorsal thalamus

Dorsal vessel heart

Dorsolateral placode

Dorsolateral prefrontal cortex

Duodeno-jejunal junction

Duodenum

Dura mater

Ear vesicle

Ectoderm-derived structure

Embryo

Embryoid body

Embryonic stem cell

Embryonic/larval hemolymph

Embryonic/larval optic lobe

Endocardium

Endocrine pancreas

Endometrium

Endothelial cell

Enteric ganglion

Entorhinal cortex

Epibranchial ganglion

Epididymal fat pad

Epithelial cell of lung

Epithelial lining fluid

Epithelium of esophagus

Epithelium of main bronchus

Epithelium of small intestine

Epithelium of trachea

Esophagogastric junction

Esophagus

Esophagus muscularis mucosa

Exocrine pancreas

External iliac lymph node

Extraembryonic tissue

Eye

Eye trabecular meshwork

Eyeball of camera-type eye

Eyelid

Fallopian tube

Fast muscle tissue

Fat body

Femoral artery

Fifth lumbar dorsal root ganglion

Fimbria of fallopian tube

Floor plate

Forebrain

Forebrain meninges

Forelimb

Fourth lumbar dorsal root ganglion

Fovea centralis

Frontal cortex

Frontal lobe

Gallbladder

Gamma-delta t cell

Ganglionic eminence

Ganglionic layer of retina

Gastrocnemius

Genitourinary system

Gingiva

Glabella skin

Globus pallidus

Gonad

Gonad primordium

Gonadal fat pad

Granular insular cortex

Gustatory cortex

Gut

Gut wall

Habenula

Haltere

Hard palate

Hatching gland

Head

Head connective tissue

Head of caudate nucleus

Heart

Heart left ventricle

Heart primordium

Heart right ventricle

Hemisphere part of cerebellar posterior lobe

Hepatic cecum

Hepatic flexure of colon

Hindbrain

Hindgut

Hindlimb

Hindlimb muscle

Hindlimb skin

Hippocampal field

Hippocampal formation

Hypaxial musculature

Hypochord

Hypothalamus

Ileal epithelium

Ileum

Ileum lamina propria

Iliac artery

Imaginal disc-derived wing

Inferior parietal cortex

Inferior temporal gyrus

Inferior vena cava

Inguinal fat pad

Inguinal lymph node

Inguinal part of abdomen

Inguinal region skin

Inner medulla of kidney

Inner nuclear layer of retina

Insect adult thorax

Insect embryonic/larval brain

Insect leg

Insect proboscis

Insula

Insular cortex

Integument

Intercostal muscle

Interrenal primordium

Interventricular septum

Intestinal epithelium

Intestinal mucosa

Intestine

Intrahepatic bile duct

Iris

Islet of langerhans

Isthmus of fallopian tube

Jejunal epithelium

Jejunum

Jejunum lamina propria

Kidney

Kidney blood vessel

Labial gland

Lacrimal gland

Lamina propria

Lamina propria of mucosa of colon

Lamina propria of small intestine

Large intestine

Lateral amygdaloid nucleus

Lateral entorhinal cortex

Lateral ganglionic eminence

Lateral geniculate body

Lateral line

Lateral line ganglion

Lateral nuclear group of thalamus

Lateral plate mesoderm

Lateral septal complex

Lateral visual area

Left atrium auricular region

Left cardiac atrium

Left coronary artery

Left frontal lobe

Left lobe of liver

Left lung

Left ovary

Left parietal lobe

Left temporal lobe

Leg

Lens of camera-type eye

Lens vesicle

Leptomeninx

Limb muscle

Lingula of left lung

Liver

Liver primordium

Lobe of cerebral hemisphere

Lower esophagus

Lower layers of the cortex

Lower leg skin

Lower lobe of left lung

Lower lobe of right lung

Lung

Lung parenchyma

Lymph node

Lymphatic vessel endothelium

Macula

Macula lutea

Macula lutea proper

Male reproductive gland

Mammary gland

Mammary gland connective tissue

Mammary gland epithelial cell

Maxillary palp

Medial amygdaloid nucleus

Medial dorsal nucleus of thalamus

Medial entorhinal cortex

Medial ganglionic eminence

Medial globus pallidus

Medial orbital frontal cortex

Median fin fold

Medulla oblongata

Meningeal dura mater

Meninx

Mesenteric artery

Mesenteric fat pad

Mesenteric lymph node

Mesoderm

Mesonephros

Metanephros

Metencephalon

Midbrain

Midbrain tectum

Midbrain tegmentum

Midbrain-hindbrain boundary

Middle lobe of right lung

Middle temporal gyrus

Milk

Minor salivary gland

Morula

Mucosa

Mucosa of dorsum of tongue

Mucosa of lip

Mucosa of sigmoid colon

Mucosa of stomach

Mucosa of transverse colon

Multicellular anatomical structure

Multiciliated ependymal cell

Muscle of abdomen

Muscle of pelvic diaphragm

Muscle organ

Muscle tissue

Muscularis mucosae of stomach

Myelencephalon

Myeloid cell

Myometrium

Myotome

Nasal cavity

Nasal cavity epithelium

Nasopharynx

Natural killer cell

Neck

Neocortex

Neural crest

Neural rod

Neural tube

Nose

Nose skin

Notochord

Nucleus accumbens

Occipital cortex

Occipital lobe

Ocular surface region

Oenocyte

Olfactory bulb

Olfactory cortex

Olfactory epithelium

Olfactory region

Olfactory system

Omental fat pad

Omentum

Open tracheal system trachea

Optic choroid

Optic cup

Optic disc

Oral cavity

Orbitofrontal cortex

Oropharynx

Outer medulla of kidney

Outer nuclear layer of retina

Ovary

Oviduct

Pallidum

Panarthropod head

Pancreas

Pancreatic epithelial bud

Parachordal cartilage

Paracolic gutter

Parenchyma of mammary gland

Parietal cortex

Parietal lobe

Parietal peritoneum

Parotid gland

Pectoral appendage bud

Pectoral fin

Periderm

Perifoveal part of retina

Periocular mesenchyme

Periodontium

Periovarian fat pad

Peripheral lymph node

Peripheral region of retina

Peripheral zone of prostate

Perirenal fat

Perirhinal cortex

Peritoneum

Pharyngeal arch

Pharyngeal pouch

Pharynx

Pia mater

Pigment epithelium of eye

Pigmented layer of retina

Piriform cortex

Placenta

Pleura

Pleural effusion

Pons

Pontine nuclear group

Post-embryonic organism

Posterior hypothalamic region

Posterior neural tube

Posterior parahippocampal gyrus

Posterior parietal association areas

Posterior part of tongue

Posterior segment of eyeball

Postnatal subventricular zone

Preadipocyte

Prefrontal cortex

Presomitic mesoderm

Primary auditory cortex

Primary motor cortex

Primary somatosensory cortex

Primary visual cortex

Proboscis

Proepicardium

Pronephric glomerulus

Pronephric mesoderm

Pronephros

Prostate gland

Proximal convoluted tubule

Pubis

Pulmonary alveolar epithelial cell

Pulmonary artery

Pulvinar nucleus

Putamen

Pyloric antrum

Rectosigmoid junction

Rectum

Rectus abdominis muscle

Renal glomerulus

Renal medulla

Renal papilla

Renal pelvis

Respiratory airway

Respiratory basal cell

Respiratory tube

Retina

Retinal neural layer

Retrosplenial granular cortex

Retrosplenial region

Rib

Right atrium auricular region

Right cardiac atrium

Right colon

Right coronary artery

Right frontal lobe

Right lobe of liver

Right lung

Right occipital lobe

Right ovary

Right parietal lobe

Right temporal lobe

Saliva

Salivary gland epithelium

Scalp

Sclera

Sclerotome

Secondary somatosensory cortex

Secondary visual cortex

Segmental bronchus

Semicircular canal

Septal nuclear complex

Seventh thoracic dorsal root ganglion

Sigmoid colon

Sinoatrial node

Skeletal muscle organ, vertebrate

Skeletal muscle tissue

Skeletal muscle tissue of tibialis anterior

Skin epidermis

Skin of abdomen

Skin of back

Skin of body

Skin of breast

Skin of calf

Skin of cheek

Skin of chest

Skin of external ear

Skin of face

Skin of forearm

Skin of forehead

Skin of hip

Skin of knee

Skin of leg

Skin of neck

Skin of pes

Skin of prepuce of penis

Skin of scalp

Skin of shoulder

Skin of temple

Skin of trunk

Slow muscle tissue

Small intestine

Small intestine peyer's patch

Soft palate

Somite

Spinal cord

Spleen

Stomach

Stomach smooth muscle

Striatum

Subcutaneous abdominal adipose tissue

Subcutaneous adipose tissue

Subdural space

Subicular complex

Subiculum

Sublingual gland

Submandibular gland

Submucosal esophageal gland

Substantia innominata

Substantia nigra pars compacta

Substantia propria of cornea

Superior frontal gyrus

Superior parietal cortex

Superior temporal sulcus

Swim bladder

Taste bud

Telencephalon

Temporal cortex

Temporal lobe

Temporoparietal junction

Tendon of quadriceps femoris

Tendon of semitendinosus

Terminal bronchus

Testis

Thalamic complex

Thoracic aorta

Thoracic lymph node

Thoracic mammary gland

Thymus

Thyroid follicle

Thyroid gland

Tongue

Tonsil

Tooth placode

Trachea

Tracheal epithelial cell

Transition zone of prostate

Transverse colon

Trigeminal ganglion

Trophoblast

Trophoblast cell

Trunk neural crest

Tunica fibrosa of eyeball

Umbilical cord blood

Upper layers of the cortex

Upper leg skin

Upper lobe of left lung

Upper lobe of right lung

Upper outer quadrant of breast

Ureter

Urethra

Urinary bladder

Uterine cervix

Uterus

Utricle of membranous labyrinth

Uvea

Vasculature

Vault of skull

Vein

Venous blood

Ventral lateral nucleus of thalamus

Ventral part of telencephalon

Ventral thalamus

Ventricular system of brain

Ventricular zone

Vermiform appendix

Vestibulocochlear ganglion

Visceral abdominal adipose tissue

Visceral fat

Visual cortex

White matter

White matter of cerebellum

White matter of frontal lobe

White matter of occipital lobe

White matter of parietal lobe

White matter of temporal lobe

Wing

Yolk sac

Zona limitans intrathalamica

Zone of skin

1-month-old stage

1-week-old stage

1-year-old stage

1-year-old stage (pig)

10-month-old stage

10-week-old stage

10-year-old stage

101-year-old stage

102-year-old stage

10th week post-fertilization stage

11-month-old stage

11-week-old stage

11-year-old stage

111-year-old stage

11th week post-fertilization stage

12-month-old stage

12-week-old stage

12-year-old stage

12th week post-fertilization stage

13-month-old stage

13-week-old stage

13-week-old stage (pig)

13-year-old stage

13th week post-fertilization stage

14-month-old stage

14-week-old stage

14-year-old stage

14-year-old stage (chimpanzee)

14-year-old stage (macaque)

14th week post-fertilization stage

15-19 year-old

15-month-old stage

15-month-old stage (opossum)

15-week-old stage

15-year-old stage

15th week post-fertilization stage

16-month-old stage

16-week-old stage

16-year-old stage

16th week post-fertilization stage

17-week-old stage

17-year-old stage

17th week post-fertilization stage

18-month-old stage

18-week-old stage

18-year-old stage

18th week post-fertilization stage

19-month-old stage

19-week-old stage

19-year-old stage

19th week post-fertilization stage

2-month-old stage

2-week-old stage

2-year-old stage

20-month-old stage

20-month-old stage and over

20-week-old stage

20-year-old stage

20th week post-fertilization stage

21-day-old stage

21-month-old stage

21-week-old stage

21-year-old stage

21-year-old stage (chimpanzee)

21st week post-fertilization stage

22-day-old stage

22-week-old stage

22-year-old stage

22nd week post-fertilization stage

23-day-old stage

23-week-old stage

23-year-old stage

23rd week post-fertilization stage

24-day-old stage

24-month-old stage

24-week-old stage

24-year-old stage

24th week post-fertilization stage

25-week-old stage

25-year-old stage

25th week post-fertilization stage

26-day-old stage

26-week-old stage

26-year-old stage

26th week post-fertilization stage

27-year-old stage

27th week post-fertilization stage

28-year-old stage

29-week-old stage

29-year-old stage

3-6 month-old mature stage

3-month-old stage

3-year-old stage

30-year-old stage

31-year-old stage

31st week post-fertilization stage

32-year-old stage

32nd week post-fertilization stage

33-year-old stage

33rd week post-fertilization stage

34-year-old stage

34th week post-fertilization stage

35-year-old stage

36-year-old stage

37-year-old stage

38-year-old stage

39-year-old stage

4-day-old stage

4-month-old stage

4-week-old stage

4-year-old stage

40-year-old stage

41-year-old stage

42-year-old stage

43-year-old stage

43-year-old stage (gorilla)

44-year-old stage

45-year-old stage

46-year-old stage

47-year-old stage

48-year-old stage

49-year-old stage

5-day-old stage

5-month-old stage

5-week-old stage

5-year-old stage

50-year-old stage

51-year-old stage

51-year-old stage (gorilla)

52-year-old stage

53-year-old stage

54-year-old stage

55-year-old stage

56-year-old stage

57-year-old stage

58-year-old stage

59-year-old stage

6-month-old stage

6-month-old stage (pig)

6-week-old stage

6-year-old stage

60-79 year-old stage

60-year-old stage

61-year-old stage

62-year-old stage

63-year-old stage

64-year-old stage

65-year-old stage

66-year-old stage

67-year-old stage

68-year-old stage

69-year-old stage

7-day-old stage

7-month-old stage

7-week-old stage

7-week-old stage (pig)

7-year-old stage

7-year-old stage (macaque)

70-year-old stage

71-year-old stage

72-year-old stage

73-year-old stage

74-year-old stage

75-year-old stage

76-year-old stage

77-year-old stage

78-year-old stage

79-year-old stage

8-month-old stage

8-week-old stage

8-year-old stage

8-year-old stage (macaque)

80 year-old and over stage

80-year-old stage

81-year-old stage

82-year-old stage

83-year-old stage

84-year-old stage

85-year-old stage

86-year-old stage

87-year-old stage

88-year-old stage

89-year-old stage

9-month-old stage

9-week-old stage

9-year-old stage

9-year-old stage (macaque)

90 year-old and over stage

90-year-old stage

91-year-old stage

92-year-old stage

93-year-old stage

94-year-old stage

95-year-old stage

96-year-old stage

97-year-old stage

9th week post-fertilization stage

Carnegie stage 09

Carnegie stage 10

Carnegie stage 11

Carnegie stage 12

Carnegie stage 13

Carnegie stage 14

Carnegie stage 15

Carnegie stage 16

Carnegie stage 17

Carnegie stage 18

Carnegie stage 19

Carnegie stage 20

Carnegie stage 21

Carnegie stage 22

Carnegie stage 23

Theiler stage 03

Theiler stage 05

Theiler stage 09

Theiler stage 10

Theiler stage 11c

Theiler stage 12

Theiler stage 13

Theiler stage 14

Theiler stage 15

Theiler stage 16

Theiler stage 17

Theiler stage 18

Theiler stage 19

Theiler stage 20

Theiler stage 21

Theiler stage 22

Theiler stage 23

Theiler stage 24

Theiler stage 25

Theiler stage 26

Theiler stage 27

Adult stage

Blastula stage

Child stage (1-4 yo)

Day 0 of adulthood

Day 1 of adulthood

Day 15 of adulthood

Day 2 of adulthood

Day 3 of adulthood

Day 30 of adulthood

Day 5 of adulthood

Day 50 of adulthood

Day 6 of adulthood

Day 9 of adulthood

Eighth lmp month stage

Eighth decade stage

Embryo stage

Embryonic stage

Fifth lmp month stage

Fifth decade stage

Fourth lmp month stage

Fourth decade stage

Fully formed stage

Hatching:long-pec

Hatching:pec-fin

Infant stage

Juvenile stage

Juvenile stage (5-14 yo)

Larval:protruding-mouth

Late adult stage

Late embryonic stage

Late third instar larval stage

Life cycle

Mature adult stage

Mature stage

Middle aged stage

Neurula stage

Newborn stage (0-28 days)

Ninth lmp month stage

Ninth decade stage

Nursing stage (0-11 months)

Organogenesis stage

Pediatric stage

Pharate adult stage p8

Pharyngula:high-pec

Pharyngula:prim-15

Pharyngula:prim-25

Pharyngula:prim-5

Post-juvenile adult stage

Postnatal stage

Prime adult stage

Pupal stage p6

Segmentation:14-19 somites

Segmentation:20-25 somites

Segmentation:26+ somites

Seventh lmp month stage

Seventh decade stage

Sixth lmp month stage

Sixth decade stage

Start, weeks post birth

Tenth decade stage

Third decade stage

Wandering third instar larval stage

Young adult stage

Alzheimer disease

B-cell acute lymphoblastic leukemia

B-cell non-hodgkin lymphoma

Barrett esophagus

Covid-19

Crohn disease

Crohn ileitis

Crohn's colitis

Down syndrome

Her2 positive breast carcinoma

Hiv infectious disease

Lewy body dementia

Parkinson disease

Pick disease

Plasmodium malariae malaria

Sjogren syndrome

Wilms tumor

Acne

Acute kidney failure

Acute myeloid leukemia

Acute myocardial infarction

Acute promyelocytic leukemia

Adenocarcinoma

Age related macular degeneration 7

Age-related macular degeneration

Alcoholic liver cirrhosis

Alopecia

Amyotrophic lateral sclerosis

Amyotrophic lateral sclerosis 26 with or without frontotemporal dementia

Anencephaly

Anorexia nervosa

Aortic disorder

Arrhythmogenic right ventricular cardiomyopathy

Aspiration pneumonia

Atherosclerosis

Atopic eczema

Atrial fibrillation

Attention deficit-hyperactivity disorder

Autosomal dominant polycystic kidney disease

Basal cell carcinoma

Basal laminar drusen

Benign prostatic hyperplasia

Bipolar i disorder

Bipolar ii disorder

Bipolar disorder

Blastoma

Bone fracture

Brain cancer

Brain neoplasm

Breast cancer

Breast carcinoma

Bronchopulmonary dysplasia

Bulimia nervosa

Cancer

Cardiomyopathy

Cataract

Cervical cancer

Chromophobe renal cell carcinoma

Chronic kidney disease

Chronic obstructive pulmonary disease

Chronic rhinitis

Clear cell renal carcinoma

Clonal hematopoiesis

Coenzyme q10 deficiency, primary, 3

Cognitive disorder

Colon adenocarcinoma

Colon sessile serrated adenoma/polyp

Colorectal cancer

Colorectal carcinoma

Colorectal neoplasm

Common variable immunodeficiency

Congenital heart disease

Coronary artery disorder

Cutaneous melanoma

Cystic fibrosis

Dementia

Diabetes mellitus

Diabetic kidney disease

Diffuse large b-cell lymphoma

Digestive system disorder

Dilated cardiomyopathy

Disease

Enamel caries

Encephalitis

Encephalomyelitis

Endocrine pancreas disorder

Epidermolysis bullosa

Epilepsy

Essential tremor

Estrogen-receptor positive breast cancer

Fibrotic liver disease

Follicular lymphoma

Frontotemporal dementia

Functional colonic disease

Functional gastric disease

Gastric cancer

Gastric intestinal metaplasia

Gastritis

Gingivitis

Glioblastoma

Granuloma annulare

Head injury

Heart disorder

Heart failure

Heart valve disorder

Hematologic disorder

Hemimegalencephaly

Hepatocellular carcinoma

Human papillomavirus-related squamous cell carcinoma

Hydrocephalus

Hydrosalpinx

Hyperplastic polyp

Hypersensitivity pneumonitis

Hypertrophic cardiomyopathy

Immune system disorder

Inflammatory disease

Influenza

Injury

Interstitial lung disease

Intestinal failure–associated liver disease

Intrahepatic cholangiocarcinoma

Invasive ductal breast carcinoma

Invasive lobular breast carcinoma

Isolated focal cortical dysplasia

Isolated focal cortical dysplasia type ii

Juvenile dermatomyositis

Keloid

Kidney benign neoplasm

Kidney oncocytoma

Leishmaniasis

Leprosy

Lesion of sciatic nerve

Leukoencephalopathy, diffuse hereditary, with spheroids 1

Listeriosis

Liver cancer

Localized scleroderma

Long covid-19

Luminal a breast carcinoma

Luminal b breast carcinoma

Lung adenocarcinoma

Lung cancer

Lung large cell carcinoma

Lymphadenitis

Lymphangioleiomyomatosis

Lymphoma

Macular degeneration

Major depressive disorder

Malignant ovarian serous tumor

Malignant pancreatic neoplasm

Melanoma

Metabolic dysfunction-associated steatohepatitis

Metastatic melanoma

Mitral valve insufficiency

Multiple sclerosis

Myasthenia gravis

Myelodysplastic syndrome

Myelodysplastic/myeloproliferative disease

Myocardial infarction

Myocardial ischemia

Myocarditis

Neuroblastoma

Neuroendocrine carcinoma

Neuromuscular junction disease

Neuropathy, painful

Non-compaction cardiomyopathy

Non-small cell lung carcinoma

Non-specific interstitial pneumonia

Nonpapillary renal cell carcinoma

Normal

Normal pressure hydrocephalus

Obsessive-compulsive disorder

Obsolete type 1 interferonopathy

Obstructive nephropathy

Open-angle glaucoma

Opiate dependence

Oral cavity squamous cell carcinoma

Oropharynx squamous cell carcinoma

Ovarian cancer

Pancreatic ductal adenocarcinoma

Periodontitis

Peripheral neuropathy

Peripheral neuropathy, non-human animal

Pilocytic astrocytoma

Pituitary hormone deficiency, combined, 2

Plasma cell myeloma

Pleomorphic carcinoma

Pneumonia

Post-covid-19 disorder

Post-traumatic stress disorder

Prediabetes syndrome

Primary biliary cholangitis

Primary cutaneous diffuse large b-cell lymphoma, leg type

Primary sclerosing cholangitis

Prion disease

Progressive supranuclear palsy

Psoriasis

Pulmonary emphysema

Pulmonary fibrosis

Pulmonary hypertension owing to lung disease and/or hypoxia

Pulmonary hypertension, primary, 1

Pulmonary sarcoidosis

Pulmonary systemic sclerosis

Pulpitis

Renal cell carcinoma

Respiratory failure

Respiratory system disorder

Response to toxic substance

Rheumatoid arthritis

Schizoaffective disorder

Schizophrenia

Severe acute respiratory syndrome

Small cell lung carcinoma

Squamous cell carcinoma

Squamous cell lung carcinoma

Systemic lupus erythematosus

Tardive dyskinesia

Tauopathy

Temporal lobe epilepsy

Tongue cancer

Toxin-mediated infectious botulism

Toxoplasmosis

Triple-negative breast carcinoma

Trisomy 18

Tuberculosis

Tuberous sclerosis

Tubular adenoma

Tubulovillous adenoma

Type 1 diabetes mellitus

Type 2 diabetes mellitus

Ulcerative colitis

Uveal melanoma

Vascular dementia

Visceral leishmaniasis

Female

Male

Mixed sex

10x 3' transcription profiling

10x 3' v1

10x 3' v2

10x 3' v3

10x 5' transcription profiling

10x 5' v1

10x 5' v2

10x gene expression flex

10x multiome

10x scatac-seq

Bd rhapsody targeted mrna

Bd rhapsody whole transcriptome analysis

Cel-seq

Cel-seq2

Dronc-seq

Drop-seq

Gexscope technology

Mars-seq

Merfish

Parse evercode whole transcriptome v2

Patch-seq

Quartz-seq

Sort-seq

Split-seq

Starmap

Strt-seq

Scalebio single cell rna sequencing

Seq-well

Seq-well s3

Slide-seqv2

Smart-seq

Smart-seq v4

Smart-seq2

Smart-seq3

Trudrop

Visium spatial gene expression v1

Indrop

Library preparation

Mct-seq

Microwell-seq

Modified strt-seq

Obsolete_10x v2

Scatac-seq

Sci-plex

Sci-rna-seq3

Single-cell rna sequencing

Snm3c-seq

Snmc-seq2

Spatial transcriptomics

Asap

Bgee

Cellxgene

Single cell portal

2116 datasets

CELLxGENE

9,110 cells •

Duran et al., 2025

A statistical framework for inferring genetic requirements from embryo-scale single-cell sequencing experiments

Explore

h5ad

Danio rerio

Epithelial cell of distal tubule +5

Epithelial cell of distal tubule

Corpuscles of stannius +5

Corpuscles of stannius

Disease

Normal

Sex

Technology

Sci-rna-seq3

CELLxGENE

1,220,178 cells •

Duran et al., 2025

A statistical framework for inferring genetic requirements from embryo-scale single-cell sequencing experiments

Explore

h5ad

Organism

Danio rerio

Cell type

Notochordal cell Glutamatergic neuron Chondroblast Enterocyte Erythrocyte Ionocyte Pancreatic endocrine cell Neural crest cell Neurecto-epithelial cell Lateral motor column neuron Auditory epithelial supporting cell Kolmer-agduhr neuron Epidermal cell Purkinje cell Lens epithelial cell Osteoblast Slow muscle myoblast Myoblast Mesenchymal cell Neuron Epithelial cell of esophagus Retinal bipolar neuron Olfactory epithelial cell Neuroplacodal cell Eye photoreceptor cell Epidermal mucus secreting cell Connective tissue cell Gabaergic neuron Notochordal sheath cell Neural progenitor cell Type b pancreatic cell Epithelial cell of distal tubule Peridermal cell Epithelial cell of exocrine pancreas Muscle precursor cell Muscle cell Chondrocyte Fast muscle myoblast Goblet cell Xanthoblast Kidney proximal convoluted tubule epithelial cell Motor neuron Taste receptor cell Cranial motor neuron Migratory cranial neural crest cell Retinal progenitor cell Splanchnic mesodermal cell Thyroid follicular cell Podocyte Adaxial cell Pericyte Migratory neural crest cell Neuromast supporting cell Hypertrophic chondrocyte Primordial germ cell Melanoblast Neuroblast (sensu vertebrata) Melanocyte Neutrophil Pancreatic d cell Premigratory neural crest cell Cardiac endothelial cell Notochordal vacuole cell Mesothelial cell Myeloid lineage restricted progenitor cell Rohon-beard neuron Epithelial cell Hepatoblast Ectodermal cell Smooth muscle cell Mesodermal cell Tendon cell Retinal ganglion cell Xanthophore cell Iridophore Retina horizontal cell Hepatocyte Lens fiber cell Spinal cord interneuron Schwann cell Amacrine cell Endodermal cell Odontoblast Macrophage Stromal cell Fast muscle cell Hatching gland cell Slow muscle cell Glial cell Sensory hair cell Endocrine cell Photoreceptor cell Retinal pigment epithelial cell Nonkeratinized cell of epidermis Glycinergic neuron Pancreatic a cell Endothelial cell Cardiac muscle cell Multiciliated epithelial cell Enteric neuron

Tissue

Adenohypophysis Anterior lateral plate mesoderm Anterior segment of eyeball Blood Blood island Blood vessel endothelium Brain Bulbus arteriosus Cerebellum Cleithrum Cloaca Corpuscles of stannius Cranial ganglion Craniocervical muscle Crista ampullaris Diencephalon Distal tubule Dorsolateral placode Ear vesicle Ectoderm-derived structure Endocardium Endocrine pancreas Enteric ganglion Epibranchial ganglion Esophagus Fast muscle tissue Floor plate Forebrain Ganglionic layer of retina Genitourinary system Gonad primordium Habenula Hatching gland Head Head connective tissue Heart Heart primordium Hindbrain Hypaxial musculature Hypochord Inner nuclear layer of retina Integument Interrenal primordium Intestinal epithelium Intestine Lateral line Lateral line ganglion Lateral plate mesoderm Lens of camera-type eye Lens vesicle Leptomeninx Liver Liver primordium Lymphatic vessel endothelium Macula Median fin fold Meninx Midbrain Midbrain tectum Midbrain tegmentum Midbrain-hindbrain boundary Multicellular anatomical structure Myotome Neural crest Neural rod Notochord Olfactory epithelium Olfactory system Outer nuclear layer of retina Pancreas Pancreatic epithelial bud Parachordal cartilage Pectoral appendage bud Pectoral fin Periderm Periocular mesenchyme Pharyngeal arch Pharyngeal pouch Pharynx Pigmented layer of retina Posterior neural tube Presomitic mesoderm Proepicardium Pronephric glomerulus Pronephric mesoderm Pronephros Proximal convoluted tubule Retina Sclerotome Semicircular canal Skin epidermis Slow muscle tissue Somite Spinal cord Swim bladder Taste bud Telencephalon Thyroid follicle Tooth placode Trigeminal ganglion Trunk neural crest Ventricular zone Vestibulocochlear ganglion Zona limitans intrathalamica

Developmental stage

Disease

Normal

Sex

Technology

Sci-rna-seq3

Single Cell Portal

3,840 cells

Explore

Mus musculus

Obsolete excitatory neuron +4

Obsolete excitatory neuron

Normal

10x 3' v2

Organism

Mus musculus

Cell type

Obsolete excitatory neuron Astrocyte Oligodendrocyte Obsolete inhibitory neuron Brain microvascular endothelial cell

Tissue

Developmental stage

Disease

Normal

Sex

Technology

10x 3' v2

CELLxGENE

35,718 cells •

Almanzar et al., 2020

A single-cell transcriptomic atlas characterizes ageing tissues in the mouse

Explore

h5ad

Mus musculus

Natural killer cell +11

Natural killer cell

Spleen

20-month-old stage and over +3

20-month-old stage and over

Organism

Mus musculus

Cell type

Natural killer cell B cell Megakaryocyte-erythroid progenitor cell Plasma cell Proerythroblast Granulocyte Immature nk t cell Erythroblast Mature nk t cell T cell Macrophage Macrophage dendritic cell progenitor

Tissue

Spleen

Developmental stage

20-month-old stage and over 18-month-old stage 3-month-old stage 4-week-old stage

Disease

Normal

Sex

Female Male

Technology

10x 3' v2

CELLxGENE

27,044 cells •

Marshall et al., 2022

High-resolution Slide-seqV2 spatial transcriptomics enables discovery of disease-specific cell neighborhoods and pathways

Explore

h5ad

Organism

Mus musculus

Cell type

Mesangial cell Kidney granular cell Kidney collecting duct intercalated cell Blood vessel smooth muscle cell Leukocyte Kidney collecting duct principal cell Kidney proximal convoluted tubule epithelial cell Podocyte Kidney interstitial fibroblast Macrophage Kidney distal convoluted tubule epithelial cell Kidney loop of henle thick ascending limb epithelial cell Endothelial cell

Tissue

Kidney

Developmental stage

6-month-old stage

Disease

Normal

Sex

Male

Technology

Slide-seqv2

CELLxGENE

1,920,782 cells •

He et al., 2024

An integrated transcriptomic cell atlas of human neural organoids

Explore

h5ad

Homo sapiens

Glutamatergic neuron +59

Glutamatergic neuron

Arcuate nucleus of hypothalamus +10

Arcuate nucleus of hypothalamus

30-year-old stage +16

Organism

Homo sapiens

Cell type

Glutamatergic neuron Fibroblast of choroid plexus Cajal-retzius cell Forebrain neuroblast Immature astrocyte Neural crest cell Midbrain dopaminergic neuron Choroid plexus epithelial cell Neural cell Oligodendrocyte precursor cell Pluripotent stem cell Cerebellar neuron Purkinje cell Stem cell Forebrain radial glial cell Astrocyte Extracellular matrix secreting cell Mesenchymal cell Neuron Central nervous system neuron Glioblast Neuroplacodal cell Eye photoreceptor cell Pyramidal neuron Gabaergic neuron Pigmented epithelial cell Neural progenitor cell Cerebral cortex neuron Mature astrocyte Neuroepithelial stem cell Interneuron Sst gabaergic cortical interneuron Hypothalamus cell Retinal progenitor cell Neural crest derived neuron Radial glial cell L6b glutamatergic cortical neuron Cerebral cortex gabaergic interneuron Neurectodermal cell Medium spiny neuron Neuroblast (sensu vertebrata) Microglial cell Premigratory neural crest cell Medial ganglionic eminence derived gabaergic cortical interneuron Epithelial cell Extratelencephalic-projecting glutamatergic cortical neuron Caudal ganglionic eminence derived cortical interneuron Mesodermal cell Bergmann glial cell Amacrine cell Cerebral cortex pyramidal neuron Cerebellum glutamatergic neuron Neuron of the forebrain Gabaergic interneuron Ciliated cell Glial cell Mueller cell Endothelial cell Neural stem cell Cerebellar granule cell

Tissue

Arcuate nucleus of hypothalamus Brain Cerebellum Cerebral cortex Choroid plexus Dorsal plus ventral thalamus Hindbrain Midbrain tectum Midbrain tegmentum Telencephalon Ventral part of telencephalon

Developmental stage

30-year-old stage 48-year-old stage 25-year-old stage 27-year-old stage Seventh decade stage Fourth decade stage 4-year-old stage Third decade stage 22-year-old stage Fifth decade stage Newborn stage (0-28 days) 36-year-old stage Blastula stage 55-year-old stage 63-year-old stage 58-year-old stage Sixth decade stage

Disease

Normal

Sex

Female Male

Technology

10x 3' v3 Drop-seq Smart-seq2 Quartz-seq 10x 3' v2 10x multiome Bd rhapsody whole transcriptome analysis Split-seq

2116 datasets

CELLxGENE

Organism

Cell type

Tissue

Developmental stage

Disease

Sex

Technology

Related Links

CELLxGENE

Organism

Cell type

Tissue

Developmental stage

Disease

Sex

Technology

Related Links

Single Cell Portal

Organism

Cell type

Tissue

Developmental stage

Disease

Sex

Technology

Related Links

CELLxGENE

Organism

Cell type

Tissue

Developmental stage

Disease

Sex

Technology

Related Links

CELLxGENE

Organism

Cell type

Tissue

Developmental stage

Disease

Sex

Technology

Related Links

CELLxGENE

Organism

Cell type

Tissue

Developmental stage

Disease

Sex

Technology

Related Links