Mus musculus

Cardiac valve cell Spinal cord interneuron Premigratory neural crest cell Paraxial cell Notochordal cell Neuroplacodal cell Hemangioblast Mesodermal cell Gut endothelial cell Primitive red blood cell Splanchnic mesodermal cell Surface ectodermal cell Midbrain dopaminergic neuron Endodermal cell

Embryo

Theiler stage 14

Normal

Slide-seqv2

Homo sapiens

Midbrain-derived inhibitory neuron T cell Central nervous system macrophage Oligodendrocyte precursor cell Oligodendrocyte Amygdala excitatory neuron Committed oligodendrocyte precursor Cerebellar granule cell Hippocampal ca1-3 neuron Lamp5 lhx6 neuron Eccentric medium spiny neuron Pvalb chandelier gabaergic interneuron Medial ganglionic eminence derived interneuron Ependymal cell Microglial cell Neuron Intratelencephalic-projecting glutamatergic cortical neuron Caudal ganglionic eminence derived interneuron Vascular associated smooth muscle cell Sst chodl gabaergic interneuron Astrocyte Fibroblast Medium spiny neuron Mammillary body neuron

Hypothalamus

42-year-old stage 29-year-old stage

Normal

Male

10x 3' v3

Nucleus

Homo sapiens

Osteoblast Neutrophil Stromal cell Natural killer cell Erythrocyte Endothelial cell Mast cell Cd8-positive, alpha-beta t cell Plasmacytoid dendritic cell Precursor b cell Basophil mast progenitor cell Primitive red blood cell Macrophage Regulatory t cell Myelocyte Immature innate lymphoid cell Mature b cell Promonocyte Common myeloid progenitor Cd14-positive monocyte Hematopoietic multipotent progenitor cell Eosinophil Megakaryocyte Progenitor cell Promyelocyte Mesenchymal stem cell Immature b cell Megakaryocyte-erythroid progenitor cell Osteoclast Dendritic cell Cd16-negative, cd56-bright natural killer cell, human Chondrocyte

Bone marrow

13th week post-fertilization stage 12th week post-fertilization stage Fourth lmp month stage

Down syndrome

Female Male

10x 5' v1

Cell

Homo sapiens

L2/3-6 intratelencephalic projecting glutamatergic neuron

Neocortex

Adult stage

Normal

Female Male

10x 3' v3

Cell

Homo sapiens

Natural killer cell Hepatic pit cell Cd8-positive, alpha-beta t cell Lymphocyte Mature b cell Myeloid cell Cd4-positive, alpha-beta t cell Erythroblast

Caudate lobe of liver

Late adult stage Prime adult stage Young adult stage

Normal

Female Male

10x 5' v1 10x 3' v2

Cell

Homo sapiens

Mammillary body neuron

Subthalamic nucleus Medial geniculate body Intralaminar nuclear group Midbrain nucleus Median tuberal portion Dorsal tegmental nucleus Substantia nigra Hypothalamus Primary motor cortex Medial zone of hypothalamus Mammillary body

42-year-old stage 29-year-old stage 50-year-old stage 60-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Danio rerio

Melanoblast Melanocyte Xanthophore cell Xanthoblast Iridophore

Multicellular anatomical structure Neural crest

Pharyngula:prim-15 Hatching:long-pec Larval:protruding-mouth Pharyngula:prim-25 Segmentation:26+ somites Segmentation:14-19 somites Hatching:pec-fin Segmentation:20-25 somites Pharyngula:high-pec Pharyngula:prim-5

Normal

Sci-rna-seq3

Nucleus

Drosophila melanogaster

Neuron Indirect flight muscle cell Fat cell Tracheolar cell Glial cell Hemocyte Epithelial cell Muscle cell Adult tracheocyte Adult glial cell Oenocyte Adult oenocyte Tendon cell

Body wall

Day 5 of adulthood

Normal

Female Male

10x 3' v3

Homo sapiens

Off-bipolar cell On-bipolar cell

Retina

65-year-old stage 77-year-old stage 70-year-old stage 79-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Effector cd8-positive, alpha-beta t cell Neutrophil Natural killer cell Gamma-delta t cell Mast cell Exhausted t cell Plasmacytoid dendritic cell Cd8-positive, alpha-beta memory t cell Regulatory t cell Plasma cell Cd4-positive, alpha-beta t cell B cell Monocyte Conventional dendritic cell

Pleural effusion Lung Axilla Liver Adrenal gland Lymph node

69-year-old stage 75-year-old stage 71-year-old stage 68-year-old stage 55-year-old stage 72-year-old stage 81-year-old stage 74-year-old stage 67-year-old stage 77-year-old stage 64-year-old stage 62-year-old stage 70-year-old stage 47-year-old stage

Small cell lung carcinoma

Female Male

10x 3' v3 10x 3' v2

Cell

Mus musculus

Oligodendrocyte precursor cell Multiciliated ependymal cell Oligodendrocyte Microglial cell Neural crest derived fibroblast Deuterosomal cell Neuroblast (sensu vertebrata) Radial glial cell Neuron associated cell

Multiciliated ependymal cell

Theiler stage 27

Normal

10x 3' v3

Cell

Homo sapiens

Stromal cell

Submucosa of ileum Submucosa of ascending colon

72-year-old stage

Normal

Female

10x 3' v3

Cell