Homo sapiens

Retinal rod cell

Retina

79-year-old stage 70-year-old stage 77-year-old stage 65-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Gabaergic amacrine cell Retinal rod cell Astrocyte Glial cell Retinal cone cell Bipolar neuron Photoreceptor cell Off-bipolar cell On-bipolar cell Interneuron Microglial cell Retinal progenitor cell Mueller cell Amacrine cell Precursor cell Retinal ganglion cell Retina horizontal cell

Normal

Mixed sex

10x 3' v1

Mus musculus

Urethra urothelial cell Luminal cell of prostate epithelium Cd1c-positive myeloid dendritic cell Classical monocyte Non-classical monocyte Lymphocyte Effector cd8-positive, alpha-beta t cell Basal cell of prostate epithelium Cd141-positive myeloid dendritic cell Neutrophil Smooth muscle cell of prostate Fibroblast Tissue-resident macrophage Intermediate monocyte B cell Effector cd4-positive, alpha-beta t cell Prostate gland microvascular endothelial cell Dendritic cell Plasma cell Seminal vesicle glandular cell Regulatory t cell Mature nk t cell T cell Plasmacytoid dendritic cell Natural killer cell Fibroblast of connective tissue of prostate

Urethra Prostate gland

2-month-old stage

Normal

Male

10x 3' v3 10x 3' v2

Cell

Homo sapiens

Inhibitory interneuron Glutamatergic neuron Vascular leptomeningeal cell Astrocyte Oligodendrocyte precursor cell Oligodendrocyte Microglial cell Endothelial cell

White matter of frontal lobe White matter of occipital lobe White matter of parietal lobe White matter of temporal lobe Prefrontal cortex

82-year-old stage 70-year-old stage 76-year-old stage 68-year-old stage 53-year-old stage 72-year-old stage 81-year-old stage 83-year-old stage

Normal Leukoencephalopathy, diffuse hereditary, with spheroids 1 Alzheimer disease

Female Male

10x 3' v3

Nucleus

Homo sapiens

L2/3 intratelencephalic projecting glutamatergic neuron Cerebral cortex gabaergic interneuron Glutamatergic neuron Vascular leptomeningeal cell Astrocyte Oligodendrocyte precursor cell Oligodendrocyte Committed oligodendrocyte precursor Sst gabaergic interneuron Microglial cell Lamp5 gabaergic interneuron Endothelial cell Vip gabaergic interneuron Pvalb gabaergic interneuron

Lobe of cerebral hemisphere Parietal lobe Temporal lobe Frontal lobe

18-year-old stage 32-year-old stage 50-year-old stage 2-year-old stage 31-year-old stage 15-year-old stage 3-year-old stage 12-year-old stage

Isolated focal cortical dysplasia type ii

Female Male

10x multiome

Nucleus

Homo sapiens

Capillary endothelial cell Innate lymphoid cell Cardiac muscle cell Mesothelial cell of epicardium Endocardial cell Adipocyte Vein endothelial cell Fibroblast Pericyte Endothelial cell Fetal cardiomyocyte Smooth muscle cell Neuron Endothelial cell of artery Cardiac mesenchymal cell Myeloid cell

Interventricular septum Apex of heart Heart left ventricle Left cardiac atrium Right cardiac atrium Basal zone of heart Heart right ventricle

10th week post-fertilization stage Embryonic stage Eighth decade stage Seventh decade stage Sixth decade stage

Normal

Female Male

10x 3' v3 10x 3' v2

Cell Nucleus

Homo sapiens

Ciliated epithelial cell Endothelial cell of lymphatic vessel Macrophage Stromal cell Mast cell Pericyte Endothelial cell B cell Secretory cell Smooth muscle cell Natural killer cell

Fimbria of fallopian tube Isthmus of fallopian tube Ampulla of fallopian tube

70-year-old stage 62-year-old stage 65-year-old stage 61-year-old stage 72-year-old stage 55-year-old stage

Normal

Female

10x 3' v3 Drop-seq

Cell

Mus musculus

Osteoblast Ectodermal cell Blood cell Mesenchymal cell Chondrocyte Neural cell

Pharyngeal arch system

Theiler stage 23 Theiler stage 21 Theiler stage 17 Theiler stage 20 Theiler stage 19 Theiler stage 22

Normal

10x 3' v3 10x multiome

Nucleus

Homo sapiens

Capillary endothelial cell Endothelial cell of lymphatic vessel Vein endothelial cell Endothelial cell Endothelial cell of artery

Epithelium of esophagus Gingiva Body of stomach Ileum Rectum Ileum lamina propria Mesenteric lymph node Parotid gland Caecum Small intestine Esophagus Colonic epithelium Jejunum Transverse colon Labial gland Pyloric antrum Sigmoid colon Periodontium Duodenum Ileal epithelium Pylorus Colon Intestine Descending colon Ascending colon Stomach Rectosigmoid junction Buccal mucosa Vermiform appendix Colonic mucosa

80-year-old stage 9th week post-fertilization stage 85-year-old stage 66-year-old stage 70-year-old stage Young adult stage Fourth decade stage 77-year-old stage 13th week post-fertilization stage 12th week post-fertilization stage 21-year-old stage 32-year-old stage 50-year-old stage 86-year-old stage 57-year-old stage 76-year-old stage 10th week post-fertilization stage 62-year-old stage Prime adult stage 46-year-old stage 52-year-old stage 60-year-old stage 22-year-old stage Carnegie stage 22 Juvenile stage (5-14 yo) 44-year-old stage 48-year-old stage 45-year-old stage 33-year-old stage 65-year-old stage 67-year-old stage Embryonic stage Eighth decade stage 75-year-old stage 23-year-old stage 37-year-old stage Adult stage 11th week post-fertilization stage 14-year-old stage 6-year-old stage 28-year-old stage 19th week post-fertilization stage 17th week post-fertilization stage 59-year-old stage 54-year-old stage Fifth decade stage 31-year-old stage 2-month-old stage 15th week post-fertilization stage 56-year-old stage 58-year-old stage Pediatric stage 68-year-old stage 61-year-old stage 34-year-old stage Carnegie stage 19 51-year-old stage 35-year-old stage 16th week post-fertilization stage 72-year-old stage 30-year-old stage 24-year-old stage 13-year-old stage 18th week post-fertilization stage Seventh decade stage 26-year-old stage 84-year-old stage 12-year-old stage 39-year-old stage Newborn stage (0-28 days) 4-year-old stage Carnegie stage 17 9-year-old stage 69-year-old stage Third decade stage 29-year-old stage 87-year-old stage 41-year-old stage Carnegie stage 18 81-year-old stage 55-year-old stage Carnegie stage 16 Sixth decade stage 11-year-old stage

Ulcerative colitis Inflammatory bowel disease Normal Crohn disease Colorectal cancer Gastric cancer

Female Male

10x 5' v2 10x 5' v1 10x 3' v3 10x 5' transcription profiling 10x 3' v1 10x 3' v2

Cell

Mus musculus

Myofibroblast cell Lymph node lymphatic vessel endothelial cell Stromal cell Epithelial cell Granulocyte B cell Enteroglial cell Plasma cell T cell Colon endothelial cell Mononuclear phagocyte

Normal

10x 3' v3

Homo sapiens

Myofibroblast cell Ciliated epithelial cell Endothelial cell of lymphatic vessel Macrophage Mast cell Fibroblast Blood vessel endothelial cell Pericyte B cell Mature nk t cell Secretory cell Smooth muscle cell

Fimbria of fallopian tube Fallopian tube Isthmus of fallopian tube Ampulla of fallopian tube

46-year-old stage 52-year-old stage 31-year-old stage 30-year-old stage

Normal

Female

10x 3' v3

Cell

Homo sapiens

Endothelial cell of umbilical vein

Endothelial cell

Newborn stage (0-28 days)

Normal

10x 3' v2

Cell