Mus musculus

T cell Granulosa cell Blood vessel endothelial cell Stromal cell Endothelial cell of lymphatic vessel Cumulus granulosa cell Mast cell Smooth muscle cell Steroidogenic stromal cell of ovary Endothelial cell of vascular tree Ovarian surface epithelial cell Adipocyte Macrophage Oviduct secretory cell Plasma cell Oocyte Late luteal cell Atretic granulosa cell Early luteal cell Theca cell Dendritic cell Ovarian fibroblast Mural granulosa cell

Ovary

12-month-old stage

Normal

Female

Slide-seqv2

Homo sapiens

Endothelial cell of lymphatic vessel Endothelial cell Endothelial cell of artery Schwann cell Smooth muscle cell Vein endothelial cell Vascular associated smooth muscle cell Fibroblast

Ureteral orifice Ureterovesical junction Dome of urinary bladder Neck of urinary bladder

21-year-old stage

Normal

Male

10x 3' v3

Nucleus Cell

Homo sapiens

Midbrain-derived inhibitory neuron T cell Central nervous system macrophage Natural killer cell Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Committed oligodendrocyte precursor Lamp5 lhx6 neuron Pvalb chandelier gabaergic interneuron Medial ganglionic eminence derived interneuron Microglial cell Thalamic excitatory neuron B cell Pericyte Neuron Monocyte Caudal ganglionic eminence derived interneuron Vascular associated smooth muscle cell Astrocyte Fibroblast

Centromedian nucleus of thalamus

50-year-old stage

Normal

Male

10x 3' v3

Nucleus

Mus musculus

Retinal ganglion cell Rod bipolar cell Retinal cone cell Retinal rod cell Myeloid cell Retina horizontal cell Amacrine cell Mueller cell Retinal blood vessel endothelial cell Fibroblast

Normal

10x 3' v3

Mus musculus

Retinal ganglion cell Rod bipolar cell Retinal cone cell Retinal rod cell Myeloid cell Retina horizontal cell Amacrine cell Mueller cell Retinal blood vessel endothelial cell Fibroblast

Normal

10x 3' v3

Homo sapiens

T cell Erythrocyte Endothelial cell Smooth muscle cell Epithelial cell Macrophage B cell Pericyte Granulocyte monocyte progenitor cell Fibroblast Dendritic cell

Thymus

19th week post-fertilization stage 13th week post-fertilization stage 17th week post-fertilization stage 16th week post-fertilization stage 18th week post-fertilization stage

Normal

Female

Visium spatial gene expression v1

Mus musculus

Podocyte Endothelial cell Kidney interstitial fibroblast Blood vessel smooth muscle cell Kidney collecting duct intercalated cell Leukocyte Macrophage Kidney distal convoluted tubule epithelial cell Kidney granular cell Kidney collecting duct principal cell Kidney loop of henle thick ascending limb epithelial cell Mesangial cell Kidney proximal convoluted tubule epithelial cell

Kidney

13-week-old stage

Diabetic kidney disease

Male

Slide-seqv2

Mus musculus

Obsolete inhibitory neuron Oligodendrocyte precursor cell Astrocyte of the cerebellum Brain microvascular endothelial cell Obsolete excitatory neuron

Normal

10x 3' v2

Homo sapiens

Cd1c-positive myeloid dendritic cell Natural killer cell Cd4-negative, cd8-negative, alpha-beta intraepithelial t cell Gamma-delta t cell Activated cd4-positive, alpha-beta t cell Hematopoietic precursor cell Platelet Effector memory cd4-positive, alpha-beta t cell Erythroid lineage cell Plasmacytoid dendritic cell Cd8-positive, alpha-beta memory t cell Cd4-positive, alpha-beta cytotoxic t cell Naive thymus-derived cd8-positive, alpha-beta t cell Memory b cell Cd16-positive, cd56-dim natural killer cell, human Innate lymphoid cell Regulatory t cell Mature b cell Activated cd8-positive, alpha-beta t cell Plasmablast Cd14-positive monocyte Cd4-positive, alpha-beta memory t cell Naive thymus-derived cd4-positive, alpha-beta t cell Mucosal invariant t cell Monocyte Naive b cell Cd16-negative, cd56-bright natural killer cell, human Effector memory cd8-positive, alpha-beta t cell

Blood

Fifth decade stage Adult stage

Visceral leishmaniasis Hiv infectious disease

Male

10x 5' v1

Cell

Homo sapiens

T cell Osteoblast Granulocyte Stromal cell Endothelial cell of venule Natural killer cell Endothelial cell of lymphatic vessel Endothelial cell of arteriole Blood vessel smooth muscle cell Capillary endothelial cell Leukocyte Plasmacytoid dendritic cell Neural cell Endothelial cell of vascular tree Adipocyte Macrophage B cell Pericyte Fibroblast Osteoclast Dendritic cell Mononuclear phagocyte

Tendon of quadriceps femoris

69-year-old stage 75-year-old stage 44-year-old stage 29-year-old stage 25-year-old stage 67-year-old stage

Normal Injury

Male

10x 3' v3

Nucleus

Homo sapiens

Blood vessel smooth muscle cell Endothelial cell of artery Lymphocyte Macrophage Microcirculation associated smooth muscle cell Fibroblast

Right coronary artery

46-year-old stage

Normal

Male

Slide-seqv2

Mus musculus

T cell Granulosa cell Blood vessel endothelial cell Stromal cell Endothelial cell of lymphatic vessel Cumulus granulosa cell Mast cell Smooth muscle cell Steroidogenic stromal cell of ovary Endothelial cell of vascular tree Ovarian surface epithelial cell Adipocyte Macrophage Oviduct secretory cell Plasma cell Oocyte Late luteal cell Atretic granulosa cell Early luteal cell Theca cell Dendritic cell Ovarian fibroblast Mural granulosa cell

Ovary

12-month-old stage

Normal

Female

Slide-seqv2