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Technology
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Cell
934
Nucleus
679
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ASAP
79
Bgee
40
CELLxGENE
2,213
Single Cell Portal
183
Sort
Most cells
Fewest cells
2515
datasets
CELLxGENE
7,495 cells
•
Article
Explore
h5ad
Homo sapiens
Homo sapiens
Cardiac endothelial cell
+4
Cardiac endothelial cell
Left atrium auricular region
+1
Left atrium auricular region
21-year-old stage
+10
21-year-old stage
Normal
Normal
Female
+1
Female
Smart-seq2
Smart-seq2
Cell
Cell
Organism
Homo sapiens
Cell type
Cardiac endothelial cell
Smooth muscle cell
Macrophage
Cardiac muscle cell
Fibroblast of cardiac tissue
Tissue
Left atrium auricular region
Heart left ventricle
Developmental stage
21-year-old stage
42-year-old stage
43-year-old stage
52-year-old stage
48-year-old stage
51-year-old stage
49-year-old stage
33-year-old stage
45-year-old stage
46-year-old stage
36-year-old stage
Disease
Normal
Sex
Female
Male
Technology
Smart-seq2
Suspension type
Cell
Related Links
GSE109816
CELLxGENE
7,417 cells
•
Gray et al., 2024
Human γδ T cells in diverse tissues exhibit site-specific maturation dynamics across the life span
Explore
h5ad
Homo sapiens
Homo sapiens
Gamma-delta t cell
Gamma-delta t cell
Lung
+4
Lung
75-year-old stage
+22
75-year-old stage
Normal
Normal
Female
+1
Female
10x 5' v2
+1
10x 5' v2
Cell
Cell
Organism
Homo sapiens
Cell type
Gamma-delta t cell
Tissue
Lung
Thoracic lymph node
Jejunum
Spleen
Mesenteric lymph node
Developmental stage
75-year-old stage
21-year-old stage
Sixth decade stage
52-year-old stage
54-year-old stage
68-year-old stage
48-year-old stage
44-year-old stage
38-year-old stage
56-year-old stage
50-year-old stage
Third decade stage
74-year-old stage
23-year-old stage
25-year-old stage
67-year-old stage
33-year-old stage
64-year-old stage
41-year-old stage
19-year-old stage
20-year-old stage
73-year-old stage
27-year-old stage
Disease
Normal
Sex
Female
Male
Technology
10x 5' v2
10x 3' v3
Suspension type
Cell
Related Links
GSE240858
CELLxGENE
7,389 cells
•
Sampath Kumar et al., 2023
Spatiotemporal transcriptomic maps of whole mouse embryos at the onset of organogenesis
Explore
h5ad
Mus musculus
Mus musculus
Cardiac valve cell
+15
Cardiac valve cell
Embryo
Embryo
Theiler stage 14
Theiler stage 14
Normal
Normal
Slide-seqv2
Slide-seqv2
Organism
Mus musculus
Cell type
Cardiac valve cell
Spinal cord interneuron
Premigratory neural crest cell
Paraxial cell
Notochordal cell
Neuroplacodal cell
Neurectodermal cell
Hemangioblast
Mesodermal cell
Gut endothelial cell
Primitive red blood cell
Splanchnic mesodermal cell
Surface ectodermal cell
Midbrain dopaminergic neuron
Endodermal cell
Anterior visceral endoderm cell
Tissue
Embryo
Developmental stage
Theiler stage 14
Disease
Normal
Sex
Technology
Slide-seqv2
Suspension type
Related Links
insitubiology.org
GSE197353
figshare.com
figshare.com
figshare.com
Bgee
7,359 cells
•
Murat et al., 2022
The molecular evolution of spermatogenesis across mammals
Explore
scRNA-Seq droplet-based processed expression values per cell population in Gorilla gorilla (tsv.gz)
scRNA-Seq droplet-based H5AD data per cell in Gorilla gorilla (h5ad)
Gorilla gorilla
Gorilla gorilla
Cell
+7
Cell
Testis
Testis
Normal
Normal
Male
Male
10x genomics v2
10x genomics v2
Organism
Gorilla gorilla
Cell type
Cell
Early spermatid
Sertoli cell
Late spermatid
Male germ line stem cell
Obsolete somatic cell
Spermatocyte
Spermatogonium
Tissue
Testis
Developmental stage
Disease
Normal
Sex
Male
Technology
10x genomics v2
Suspension type
Related Links
ebi.ac.uk
CELLxGENE
7,358 cells
Explore
h5ad
Homo sapiens
Homo sapiens
Tip cell
+6
Tip cell
Forebrain meninges
+2
Forebrain meninges
13th week post-fertilization stage
+8
13th week post-fertilization stage
Normal
Normal
Female
+1
Female
10x 3' v3
10x 3' v3
Cell
Cell
Organism
Homo sapiens
Cell type
Tip cell
Endothelial cell
Endothelial cell of arteriole
Endothelial cell of artery
Capillary endothelial cell
Embryonic blood vessel endothelial progenitor cell
Vein endothelial cell
Tissue
Forebrain meninges
Brain meninx
Meninx
Developmental stage
13th week post-fertilization stage
12th week post-fertilization stage
Carnegie stage 20
9th week post-fertilization stage
Carnegie stage 23
10th week post-fertilization stage
Carnegie stage 21
Carnegie stage 16
Carnegie stage 18
Disease
Normal
Sex
Female
Male
Technology
10x 3' v3
Suspension type
Cell
Related Links
github.com
CELLxGENE
7,348 cells
•
Liang et al., 2023
A multi-omics atlas of the human retina at single-cell resolution
Explore
h5ad
Homo sapiens
Homo sapiens
Retina horizontal cell
Retina horizontal cell
Peripheral region of retina
+2
Peripheral region of retina
65-year-old stage
+4
65-year-old stage
Normal
Normal
Female
+1
Female
10x 3' v3
10x 3' v3
Nucleus
Nucleus
Organism
Homo sapiens
Cell type
Retina horizontal cell
Tissue
Peripheral region of retina
Macula lutea proper
Fovea centralis
Developmental stage
65-year-old stage
84-year-old stage
78-year-old stage
73-year-old stage
83-year-old stage
Disease
Normal
Sex
Female
Male
Technology
10x 3' v3
Suspension type
Nucleus
Related Links
retina-atac.cells.ucsc.edu
explore.data.humancellatlas.org
GSE226108
Single Cell Portal
7,340 cells
Explore
Mus musculus
Mus musculus
Obsolete inhibitory neuron
+2
Obsolete inhibitory neuron
Normal
Normal
10x 3' v2
10x 3' v2
Organism
Mus musculus
Cell type
Obsolete inhibitory neuron
Astrocyte of the cerebellum
Obsolete excitatory neuron
Tissue
Developmental stage
Disease
Normal
Sex
Technology
10x 3' v2
Suspension type
Related Links
Corresponding registered brain section (MD710) (section 133)
Corresponding registered brain section (MD710) (section 134)
Corresponding registered brain section (MD710) (section 135)
Corresponding registered brain section (MD710) (section 136)
Corresponding registered brain section (MD710) (section 137)
Corresponding registered brain section (MD710) (section 138)
CELLxGENE
7,334 cells
•
Sampath Kumar et al., 2023
Spatiotemporal transcriptomic maps of whole mouse embryos at the onset of organogenesis
Explore
h5ad
Mus musculus
Mus musculus
Cardiac valve cell
+13
Cardiac valve cell
Embryo
Embryo
Theiler stage 14
Theiler stage 14
Normal
Normal
Slide-seqv2
Slide-seqv2
Organism
Mus musculus
Cell type
Cardiac valve cell
Spinal cord interneuron
Premigratory neural crest cell
Paraxial cell
Notochordal cell
Neuroplacodal cell
Hemangioblast
Mesodermal cell
Gut endothelial cell
Primitive red blood cell
Splanchnic mesodermal cell
Surface ectodermal cell
Midbrain dopaminergic neuron
Endodermal cell
Tissue
Embryo
Developmental stage
Theiler stage 14
Disease
Normal
Sex
Technology
Slide-seqv2
Suspension type
Related Links
insitubiology.org
GSE197353
figshare.com
figshare.com
figshare.com
CELLxGENE
7,327 cells
•
Article
Explore
h5ad
Mus musculus
Mus musculus
Granulosa cell
+19
Granulosa cell
Ovary
Ovary
3-month-old stage
3-month-old stage
Normal
Normal
Female
Female
Slide-seqv2
Slide-seqv2
Organism
Mus musculus
Cell type
Granulosa cell
Blood vessel endothelial cell
Stromal cell
Endothelial cell of lymphatic vessel
Cumulus granulosa cell
Smooth muscle cell
Steroidogenic stromal cell of ovary
Endothelial cell of vascular tree
Ovarian surface epithelial cell
Adipocyte
Macrophage
Oviduct secretory cell
Oocyte
Late luteal cell
Atretic granulosa cell
Early luteal cell
Theca cell
Dendritic cell
Ovarian fibroblast
Mural granulosa cell
Tissue
Ovary
Developmental stage
3-month-old stage
Disease
Normal
Sex
Female
Technology
Slide-seqv2
Suspension type
Bgee
7,318 cells
•
Murat et al., 2022
The molecular evolution of spermatogenesis across mammals
Explore
scRNA-Seq droplet-based processed expression values per cell population in Callithrix jacchus (tsv.gz)
scRNA-Seq droplet-based H5AD data per cell in Callithrix jacchus (h5ad)
Callithrix jacchus
Callithrix jacchus
Cell
+7
Cell
Testis
Testis
Late adult stage
Late adult stage
Normal
Normal
Male
Male
10x genomics v2
10x genomics v2
Organism
Callithrix jacchus
Cell type
Cell
Early spermatid
Sertoli cell
Late spermatid
Male germ line stem cell
Obsolete somatic cell
Spermatocyte
Spermatogonium
Tissue
Testis
Developmental stage
Late adult stage
Disease
Normal
Sex
Male
Technology
10x genomics v2
Suspension type
Related Links
ebi.ac.uk
CELLxGENE
7,308 cells
•
Isola et al., 2024
A single-cell atlas of the aging mouse ovary
Explore
h5ad
Mus musculus
Mus musculus
Granulosa cell
+5
Granulosa cell
Ovary
Ovary
3-month-old stage
+1
3-month-old stage
Normal
Normal
Female
Female
10x 3' v3
10x 3' v3
Cell
Cell
Organism
Mus musculus
Cell type
Granulosa cell
Pre-theca cell
Smooth muscle cell
Connective tissue cell
Pericyte
Theca cell
Tissue
Ovary
Developmental stage
3-month-old stage
9-month-old stage
Disease
Normal
Sex
Female
Technology
10x 3' v3
Suspension type
Cell
Related Links
GSE232309
github.com
omrf.shinyapps.io
CELLxGENE
7,299 cells
•
Sampath Kumar et al., 2023
Spatiotemporal transcriptomic maps of whole mouse embryos at the onset of organogenesis
Explore
h5ad
Mus musculus
Mus musculus
Cardiac valve cell
+15
Cardiac valve cell
Embryo
Embryo
Theiler stage 14
Theiler stage 14
Normal
Normal
Slide-seqv2
Slide-seqv2
Organism
Mus musculus
Cell type
Cardiac valve cell
Spinal cord interneuron
Premigratory neural crest cell
Paraxial cell
Notochordal cell
Neuroplacodal cell
Neurectodermal cell
Hemangioblast
Mesodermal cell
Gut endothelial cell
Primitive red blood cell
Splanchnic mesodermal cell
Surface ectodermal cell
Midbrain dopaminergic neuron
Endodermal cell
Anterior visceral endoderm cell
Tissue
Embryo
Developmental stage
Theiler stage 14
Disease
Normal
Sex
Technology
Slide-seqv2
Suspension type
Related Links
insitubiology.org
GSE197353
figshare.com
figshare.com
figshare.com
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