Homo sapiens

Endothelial cell of hepatic sinusoid T cell Blood vessel endothelial cell Hepatocyte Mature nk t cell Blood vessel smooth muscle cell Hepatic stellate cell Macrophage Malignant cell Neuron Fibroblast

Liver

31-year-old stage

Breast cancer

Female

Slide-seqv2

Mus musculus

Podocyte Endothelial cell Kidney interstitial fibroblast Blood vessel smooth muscle cell Kidney collecting duct intercalated cell Leukocyte Macrophage Kidney distal convoluted tubule epithelial cell Kidney granular cell Kidney collecting duct principal cell Kidney loop of henle thick ascending limb epithelial cell Mesangial cell Kidney proximal convoluted tubule epithelial cell

Kidney

13-week-old stage

Normal

Male

Slide-seqv2

Homo sapiens

Immature t cell Leukocyte Microglial cell Perivascular macrophage

Medulla oblongata Hindbrain Telencephalon Midbrain Cerebellum Brain Diencephalon Pons

13th week post-fertilization stage 12th week post-fertilization stage 9th week post-fertilization stage 10th week post-fertilization stage Embryonic stage

Normal

Female Male

10x multiome

Nucleus

Mus musculus

Neutrophil Germinal center b cell Endothelial cell of lymphatic vessel B cell zone reticular cell Gamma-delta t cell Endothelial cell Mast cell Group 2 innate lymphoid cell Igm plasmablast Capillary endothelial cell Epithelial cell Plasmacytoid dendritic cell Group 3 innate lymphoid cell Naive thymus-derived cd8-positive, alpha-beta t cell T-helper 17 cell Macrophage Memory b cell Cd103-positive dendritic cell Regulatory t cell Glial cell Plasma cell Cd4-positive, alpha-beta memory t cell Pericyte Cd8-alpha-positive cd11b-negative dendritic cell Naive thymus-derived cd4-positive, alpha-beta t cell Monocyte Naive b cell Myofibroblast cell Conventional dendritic cell Fibroblast Dendritic cell

Caecum Lamina propria of small intestine Small intestine peyer's patch Mesenteric lymph node

Prime adult stage

Normal

10x 5' v2

Cell

Mus musculus

Glutamatergic neuron Gabaergic neuron

Diencephalon

Theiler stage 26

Normal

Female Male

10x 3' v3

Cell

Mus musculus

T cell Granulosa cell Blood vessel endothelial cell Stromal cell Endothelial cell of lymphatic vessel Cumulus granulosa cell Smooth muscle cell Steroidogenic stromal cell of ovary Endothelial cell of vascular tree Ovarian surface epithelial cell Adipocyte Macrophage Oviduct secretory cell Oocyte Late luteal cell Atretic granulosa cell Early luteal cell Theca cell Dendritic cell Ovarian fibroblast Mural granulosa cell

Ovary

3-month-old stage

Normal

Female

Slide-seqv2

Homo sapiens

Kidney cell Podocyte Epithelial cell of proximal tubule Kidney loop of henle epithelial cell Kidney epithelial cell Mesenchymal cell

Kidney

13th week post-fertilization stage 12th week post-fertilization stage 16th week post-fertilization stage 9th week post-fertilization stage 10th week post-fertilization stage Embryonic stage

Normal

Female Male

10x 3' v2

Cell

Homo sapiens

T cell Central nervous system macrophage Natural killer cell Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Amygdala excitatory neuron Committed oligodendrocyte precursor Lamp5 lhx6 neuron Eccentric medium spiny neuron Pvalb chandelier gabaergic interneuron Medial ganglionic eminence derived interneuron Microglial cell Pericyte Cerebral cortex neuron Near-projecting glutamatergic cortical neuron Neuron Monocyte Intratelencephalic-projecting glutamatergic cortical neuron Caudal ganglionic eminence derived interneuron Vascular associated smooth muscle cell Sst chodl gabaergic interneuron Astrocyte Fibroblast Medium spiny neuron

Anterior cortical amygdaloid nucleus

50-year-old stage

Normal

Male

10x 3' v3

Nucleus

Homo sapiens

Pancreatic d cell

Islet of langerhans

66-year-old stage 37-year-old stage 21-year-old stage 34-year-old stage 42-year-old stage 26-year-old stage 53-year-old stage 61-year-old stage 52-year-old stage 54-year-old stage 48-year-old stage 30-year-old stage 38-year-old stage 55-year-old stage 50-year-old stage 51-year-old stage 57-year-old stage 49-year-old stage 35-year-old stage 58-year-old stage 59-year-old stage 25-year-old stage 32-year-old stage 45-year-old stage 62-year-old stage 60-year-old stage 63-year-old stage 40-year-old stage

Prediabetes syndrome Normal Type 2 diabetes mellitus

Female Male

10x 3' v3 10x 3' v2

Cell

Homo sapiens

Fibroblast of connective tissue of glandular part of prostate Smooth muscle cell of prostate Pericyte Fibroblast of connective tissue of nonglandular part of prostate Vascular associated smooth muscle cell

Transition zone of prostate Peripheral zone of prostate

71-year-old stage 29-year-old stage 72-year-old stage 81-year-old stage 74-year-old stage 67-year-old stage 31-year-old stage 73-year-old stage

Benign prostatic hyperplasia Normal

Male

10x 3' v3 10x 3' v2

Cell

Homo sapiens

Glutamatergic neuron Cerebellar granule cell Neuron Gabaergic neuron

Cervical spinal cord white matter Brodmann (1909) area 4 White matter of cerebellum

37-year-old stage 34-year-old stage 42-year-old stage 71-year-old stage 61-year-old stage 39-year-old stage 44-year-old stage 72-year-old stage 74-year-old stage 45-year-old stage 63-year-old stage 73-year-old stage 40-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Ciliated cell Epithelial cell Glandular secretory epithelial cell

Endometrium

37-year-old stage 26-year-old stage 29-year-old stage Third decade stage Young adult stage

Normal

Female

10x 3' v3 10x 3' v2

Cell