Single Cell Portal

945 cells •

Satija et al., 2015

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,679 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

49,300 cells •

MacOsko et al., 2015

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

38,408 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

7,438 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,301 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

13,313 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

49,234 cells •

Dixit et al., 2016

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

5,634 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

14,963 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

6,341 cells •

Venteicher et al., 2017

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

39,744 cells •

Jerby-Arnon et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,078 cells •

Villani et al., 2017

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

4,347 cells •

Tirosh et al., 2016

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

28,462 cells •

Biton et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

365,492 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

4,280 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

38,731 cells •

Farrell et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

4,058 cells •

Filbin et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

7,193 cells •

Montoro et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

165,679 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

11,416 cells •

Ariss et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

166,242 cells •

Velasco et al., 2019

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

5,758 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

20,581 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

15 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

39,563 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,945 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

23,092 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

12,320 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

5,451 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

9,923 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

3,421 cells •

Leigh et al., 2018

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

976 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

39,086 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

13,783 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

24,131 cells •

Neftel et al., 2019

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

31,021 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,013 cells •

Leigh et al., 2018

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

79,862 cells •

Richards et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

72,914 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

5,265 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

126,351 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v2

Single Cell Portal

8,270 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

112,345 cells •

Tran et al., 2019

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

41,976 cells •

Winchell et al., 2023

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⚠️

Cell type: No cell types are linked to ontology terms

Macaca fascicularis Tuberculosis Seq-well s3

Single Cell Portal

35,173 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

19,393 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

102,441 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Dry eye syndrome +9 10x 3' v3 +1

Single Cell Portal

22,800 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

86,253 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

21,011 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

133,715 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

59,216 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

11,167 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

17,627 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

32,690 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,552 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

42,782 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

277,224 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

26,039 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

10,856 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

12,648 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

37,969 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

263,828 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

101,999 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

50,426 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

215,334 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

176,421 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

102,655 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

59,769 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

41,749 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Caenorhabditis elegans Normal 10x 3' v3

Single Cell Portal

35,842 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

44,085 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

3,865 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

218,331 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

4,446 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

33,496 cells •

Marjanovic et al., 2020

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,389 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

6,656 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v3

Single Cell Portal

73,511 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

13,569 cells •

Miao et al., 2020

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,279 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,378 cells •

Miao et al., 2020

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

16,305 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

19,724 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Obesity disorder 10x transcription profiling

Single Cell Portal

371,223 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Colon adenocarcinoma +1 10x 3' v2 +1

Single Cell Portal

33,872 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

49,067 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

12,619 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

15,111 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

4,785 cells •

Restall et al., 2020

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

116,313 cells •

Melms et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal +1 10x 3' v3

Single Cell Portal

88,031 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,517 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

24,271 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

126,356 cells

Explore

🔧

Cell type: Ontology term with identifier 'Microglia' not found

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Ataxia telangiectasia +1 10x 3' v3

Single Cell Portal

44,939 cells

Explore

🔧

Cell type: Ontology term with identifier 'IN-SST' not found

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Ataxia telangiectasia +1 10x 3' v3

Single Cell Portal

26,556 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Cancer +2 Seq-well

Single Cell Portal

2,170 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Metastatic prostate carcinoma Smart-seq2

Single Cell Portal

98,047 cells •

Di Bella et al., 2020

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v2

Single Cell Portal

3,798 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Spatial transcriptomics

Single Cell Portal

34,326 cells •

Bi et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Clear cell renal carcinoma +1 10x 3' v2

Single Cell Portal

32,588 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal +3 Seq-well

Single Cell Portal

3,087 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v2

Single Cell Portal

9,981 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Melanoma of soft tissue 10x 5' v2

Single Cell Portal

32,743 cells •

Dolgalev et al., 2021

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v2

Single Cell Portal

363,870 cells •

Emont et al., 2022

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal +1 10x 3' v3 +1

Single Cell Portal

5,075 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v2

Single Cell Portal

8,279 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Obsolete_10x v3

Single Cell Portal

34,742 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Malignant leptomeningeal tumor Seq-well

Single Cell Portal

306 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus domesticus Normal Smart-seq2 protocol

Single Cell Portal

23,949 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Obsolete_10x v3

Single Cell Portal

5,368 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v2

Single Cell Portal

15,880 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Obsolete_10x v3

Single Cell Portal

72,165 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Alzheimer disease Starmap

Single Cell Portal

46,261 cells •

Balboa et al., 2021

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v1

Single Cell Portal

1,203 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Infectious disease +1 Smart-seq2

Single Cell Portal

90,691 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Felis catus Normal +1 10x 3' v3

Single Cell Portal

4,813 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v2

Single Cell Portal

2,668 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Drop-seq

Single Cell Portal

15,373 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Melanoma Smart-seq2

Single Cell Portal

6,920 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Drop-seq

Single Cell Portal

4,086 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v2

Single Cell Portal

17,331 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Drop-seq

Single Cell Portal

8,657 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Drop-seq

Single Cell Portal

437,429 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal +2 10x 3' v1

Single Cell Portal

75,772 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Covid-19 +1 10x 3' v3

Single Cell Portal

2,857 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Drosophila melanogaster Normal Mixed 10x 3' v3

Single Cell Portal

3,806 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Drosophila melanogaster Normal 10x 3' v3

Single Cell Portal

9,918 cells •

Wen et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

Danio rerio Normal 10x 3' transcription profiling

Single Cell Portal

150,830 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Slide-seq

Single Cell Portal

128,118 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Slide-seq

Single Cell Portal

13,507 cells •

Singh et al., 2022

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⚠️

Cell type: No cell types are linked to ontology terms

Danio rerio Normal 10x 3' v3

Single Cell Portal

6,262 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Danio rerio Normal 10x 3' v2

Single Cell Portal

130,605 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal +2 10x 3' v3

Single Cell Portal

19,877 cells •

Mead et al., 2022

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Seq-well

Single Cell Portal

2,997 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v3

Single Cell Portal

288 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Smart-like

Single Cell Portal

52,681 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 5' v2

Single Cell Portal

2,231 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v2

Single Cell Portal

777,092 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Scatac-seq +3

Single Cell Portal

114,761 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 5' v2 +1

Single Cell Portal

480,688 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal +2 10x 3' v1

Single Cell Portal

5,728 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v2

Single Cell Portal

11,227 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

36,170 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v3

Single Cell Portal

697,916 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Macaca fascicularis Normal Slide-seq

Single Cell Portal

106,960 cells •

Shekhar et al., 2022

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v2 +1

Single Cell Portal

329,762 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 5' v1 +2

Single Cell Portal

23,274 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Obesity disorder 10x 3' v2

Single Cell Portal

16,015 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal +1 10x 3' v3

Single Cell Portal

45,549 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x multiome

Single Cell Portal

104,553 cells •

Nault et al., 2022

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal +1 10x 3' v3

Single Cell Portal

195,248 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Mixed 10x 3' v3

Single Cell Portal

129,441 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v2

Single Cell Portal

21,644 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Synucleinopathy +1 10x 3' v3

Single Cell Portal

10,741 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v1

Single Cell Portal

45,385 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

71,689 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Aortic aneurysm +1 10x 3' v3

Single Cell Portal

48,911 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v2 +1

Single Cell Portal

6,049 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Carotid artery disorder +1 10x 3' v3

Single Cell Portal

30,237 cells

Explore

🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Ovis aries' with tax_id '9940''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal +1 10x 3' v2

Single Cell Portal

201,986 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Glioblastoma 10x 3' v2 +1

Single Cell Portal

70,925 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Slide-seq

Single Cell Portal

18,152 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v2

Single Cell Portal

22,155 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Neurodegenerative disease 10x 3' v2

Single Cell Portal

120,000 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

98,608 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Cancer 10x 3' v3

Single Cell Portal

11,690 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Danio rerio Normal 10x 3' v3

Single Cell Portal

6,732 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Cite-seq (cell surface protein profiling)

Single Cell Portal

72,643 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' transcription profiling

Single Cell Portal

94,925 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' transcription profiling

Single Cell Portal

49,472 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' transcription profiling

Single Cell Portal

67,298 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' transcription profiling

Single Cell Portal

2,638 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v1

Single Cell Portal

94,510 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' transcription profiling

Single Cell Portal

1,565 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Obsolete_10x v3

Single Cell Portal

11,085 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal +1 10x 3' v3

Single Cell Portal

48,814 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' transcription profiling

Single Cell Portal

28,994 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Danio rerio Normal 10x 3' v1

Single Cell Portal

4,635 cells

Explore

🔧

Cell type: Ontology term with identifier 'Neuron:8' not found

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

839 cells

Explore

🔧

Cell type: Ontology term with identifier 'Micro' not found

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

5,778 cells

Explore

🔧

Cell type: Ontology term with identifier 'T:double:neg' not found

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v3

Single Cell Portal

4,067 cells

Explore

🔧

Cell type: Ontology term with identifier 'Microglia' not found

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v3

Single Cell Portal

4,804 cells

Explore

🔧

Cell type: Ontology term with identifier 'endothelial' not found

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Melanoma 10x 3' v3

Single Cell Portal

56,702 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Slide-seqv2

Single Cell Portal

18,569 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

1,147,212 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Ovarian carcinoma Smfish

Single Cell Portal

44,751 cells

Explore

🔧

Cell type: Ontology term with identifier 'DE:MEN' not found

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Starmap

Single Cell Portal

41,932 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Acute myeloid leukemia 10x 3' v3

Single Cell Portal

7,949 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

7,097 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

155,183 cells •

Herb et al., 2023

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' transcription profiling

Single Cell Portal

81,357 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Nothobranchius furzeri Normal 10x 3' v3

Single Cell Portal

11,471 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v3

Single Cell Portal

12,147 cells •

Ford et al., 2025

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Danio rerio Normal 10x 3' v2

Single Cell Portal

1,459,214 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Non-small cell lung carcinoma Merfish

Single Cell Portal

5,555 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v2

Single Cell Portal

20,799 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Seq-well

Single Cell Portal

36,405 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Seq-well

Single Cell Portal

527,362 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Glioma Seq-well s3 +2

Single Cell Portal

8,350 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Hepatitis c virus infection Smart-seq2

Single Cell Portal

24,048 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Gastric neuroendocrine neoplasm +2 10x 5' v2

Single Cell Portal

185,822 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Pancreatic adenocarcinoma 10x 5' v2

Single Cell Portal

56,531 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v3

Single Cell Portal

68,221 cells

Explore

🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Influenza Mixed 10x 3' v2

Single Cell Portal

386,703 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

420,288 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x technology

Single Cell Portal

24,181 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Clear cell renal carcinoma 10x 5' v2

Single Cell Portal

10,000 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

36,456 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x multiome

Single Cell Portal

447,874 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Ovarian carcinoma Smfish

Single Cell Portal

491,792 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Ovarian carcinoma Smfish

Single Cell Portal

4,000 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x multiome

Single Cell Portal

18,585 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Ovarian carcinoma 10x feature barcode (crispr screening)

Single Cell Portal

21,940 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Uveitis 10x 5' v2

Single Cell Portal

3,009 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x multiome

Single Cell Portal

956,356 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Arabidopsis thaliana Normal 10x 3' v3 +1

Single Cell Portal

11,511 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x multiome

Single Cell Portal

23,479 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus musculus Melanoma 10x 5' v3

Single Cell Portal

88,360 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Macaca fascicularis Tuberculosis Seq-well s3

Single Cell Portal

13,159 cells •

Mayassi et al., 2024

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Visium spatial gene expression

Single Cell Portal

2,479 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,197 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

10,141 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Visium spatial gene expression

Single Cell Portal

111,907 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v3

Single Cell Portal

365 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

47,891 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

19,200 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v3

Single Cell Portal

6,812 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Visium spatial gene expression

Single Cell Portal

215,046 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v3

Single Cell Portal

1,668 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

19,057 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

145,452 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Obesity disorder +1 10x 3' v1

Single Cell Portal

22,609 cells •

Hansen et al., 2025

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

25,795 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Obesity disorder +1 10x xenium

Single Cell Portal

9,943 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

603 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

72,552 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Esophageal adenocarcinoma +1 10x multiome

Single Cell Portal

347,017 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Crohn disease +1 10x 3' v3

Single Cell Portal

1,827 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,721 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

33,966 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Esophageal adenocarcinoma +1 10x multiome

Single Cell Portal

31,326 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

6,739 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

720,633 cells •

Kong et al., 2023

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Crohn disease +1 10x 3' v3 +2

Single Cell Portal

35,026 cells

Explore

🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Gallus gallus' with tax_id '9031''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal Mixed 10x 3' v2

Single Cell Portal

12,280 cells

Explore

🔧

Cell type: Ontology term with identifier 'UDC' not found

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

9,026 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

157,293 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Congenital heart disease 10x 3' v3

Single Cell Portal

35,338 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Bos taurus Mastitis 10x 3' v3

Single Cell Portal

677,785 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

14,835 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v3

Single Cell Portal

70,925 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Slide-seq

Single Cell Portal

40,623 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

11,634 cells

Explore

🔧

Organism: No organism found with tax_id '1'

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Disease Single cell library construction

Single Cell Portal

5,525 cells •

Liu et al., 2021

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

985 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,112 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

120,021 cells •

Mayassi et al., 2024

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Visium spatial gene expression

Single Cell Portal

45,087 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Alzheimer disease +1 10x 3' v2

Single Cell Portal

17,911 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

38,274 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

68,241 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Senescent +1 10x 3' v3

Single Cell Portal

393,763 cells

Explore

🔧

Cell type: Ontology term with identifier 'Monocyte (FCGR3A)' not found

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Eosinophilic esophagitis +1 10x 3' transcription profiling

Single Cell Portal

875,225 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

6,083 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

14,015 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Tuberculosis 10x 3' v3

Single Cell Portal

47,509 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

5,269 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v2

Single Cell Portal

14,835 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v3

Single Cell Portal

221,785 cells •

Cheng et al., 2022

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

9,278 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

41,399 cells

Explore

🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal 10x 3' v3

Single Cell Portal

28,723 cells •

Haber et al., 2017

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

32,523 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

7,345 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

8,113 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v2

Single Cell Portal

8,477 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

3,386 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

8,468 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Drop-seq

Single Cell Portal

27,362 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Lymphocytic choriomeningitis 10x 3' v2

Single Cell Portal

43,257 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,306,127 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

197,704 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Autism 10x technology

Single Cell Portal

12,531 cells •

Leigh et al., 2018

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

133,283 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,322 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

287,269 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,484 cells •

Mead et al., 2022

Explore

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Seq-well

Single Cell Portal

2,304 cells •

Chaligne et al., 2021

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

487 cells •

Reitman et al., 2019

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

16,291 cells •

Sade-Feldman et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

96,786 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

425,578 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Ovarian carcinoma Smfish

Single Cell Portal

57,120 cells •

Dixit et al., 2016

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

85,821 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Ovarian carcinoma Smfish

Single Cell Portal

121,779 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

302 cells •

Gaublomme et al., 2015

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

8,570 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Obsolete_10x v3

Single Cell Portal

6,975 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

3,725 cells •

Manoranjan et al., 2020

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

10,651 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

47,001 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

58,117 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Indrop

Single Cell Portal

52,602 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

7,858 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,116 cells

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🔧

Cell type: Ontology term with identifier 'spleen:tc:rep1a' not found

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

102,710 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal +1 10x 3' v3 +1

Single Cell Portal

9,166 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal Visium spatial gene expression

Single Cell Portal

78,666 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Influenza Mixed 10x 3' v2

Single Cell Portal

44,841 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v2

Single Cell Portal

1,798 cells •

Liu et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

Danio rerio Normal 10x 3' v3

Single Cell Portal

44,754 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal 10x 3' v2

Single Cell Portal

6,408 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal 10x 3' v2

Single Cell Portal

137,841 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

14,816 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Influenza +1 Mixed 10x 5' v2

Single Cell Portal

40,522 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal +1 10x 3' v3

Single Cell Portal

24,007 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

12,619 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

72,543 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

34,203 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Drosophila melanogaster Normal Mixed 10x 3' v3

Single Cell Portal

931 cells •

Reitman et al., 2019

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

72,936 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' transcription profiling

Single Cell Portal

8,566 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

13,684 cells •

Li et al., 2020

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v2

Single Cell Portal

19,659 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

22,175 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

294,846 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Obesity disorder 10x 3' transcription profiling

Single Cell Portal

3,891 cells •

Marjanovic et al., 2020

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

53,513 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

234,490 cells •

Mayassi et al., 2024

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Single-cell rna sequencing

Single Cell Portal

58,067 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

87,187 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

27,499 cells •

Shekhar et al., 2016

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

75,189 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal +1 Smart-seq2 +1

Single Cell Portal

18,194 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

65,481 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Rattus norvegicus' with tax_id '10116''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal 10x 3' v2

Single Cell Portal

300,000 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

17,179 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

117,573 cells •

Wu et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Breast cancer +2 10x 5' v2

Single Cell Portal

6,237 cells

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🔧

Cell type: Ontology term with identifier 'Microglia' not found

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

119,173 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Starmap

Single Cell Portal

1,701 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

14,293 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,535 cells

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🔧

Cell type: Ontology term with identifier 'myeloid' not found

⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Melanoma 10x multiome

Single Cell Portal

18,345 cells •

Willms et al., 2022

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⚠️

Cell type: No cell types are linked to ontology terms

Danio rerio Normal 10x 3' v1

Single Cell Portal

9,662 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

7,758 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal +1 Visium spatial gene expression

Single Cell Portal

4,645 cells •

Tirosh et al., 2016

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

16,306 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

7,107 cells •

Kiner et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,329 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Patch-seq

Single Cell Portal

695 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal 10x 3' v3

Single Cell Portal

504,278 cells

Explore

🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Rattus norvegicus' with tax_id '10116''

⚠️

Organism: No organisms are linked to ontology terms

White adipocyte +32 Normal 10x 3' v2

Single Cell Portal

236,285 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

3,654 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Drosophila melanogaster Normal 10x 3' v3

Single Cell Portal

6,757 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

106,792 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

4,058 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

14,607 cells

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🔧

Cell type: Ontology term with identifier 'Monocyte' not found

⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v2

Single Cell Portal

32,282 cells • Article

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Metabolic dysfunction-associated steatotic liver disease 10x 3' v3

Single Cell Portal

50,112 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

40,164 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

26,518 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus musculus Myocardial infarction 10x 3' v3

Single Cell Portal

45,850 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Influenza Mixed 10x 5' v2

Single Cell Portal

586,460 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,402 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

28,580 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

20,921 cells •

Campbell et al., 2017

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

11,471 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Mixed 10x 3' v3

Single Cell Portal

1,091,280 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Starmap

Single Cell Portal

209,126 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

283,894 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

12,122 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

7,260 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Visium spatial gene expression

Single Cell Portal

671 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

120,300 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

15 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

5,856 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Rattus norvegicus' with tax_id '10116''

⚠️

Organism: No organisms are linked to ontology terms

Regular atrial cardiac myocyte +8 Normal 10x 3' v2

Single Cell Portal

123,221 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

33,392 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Rattus norvegicus' with tax_id '10116''

⚠️

Organism: No organisms are linked to ontology terms

Alveolar macrophage +24 Pulmonary hypertension owing to lung disease and/or hypoxia +2 Drop-seq

Single Cell Portal

22,397 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

49,442 cells •

Siebert et al., 2019

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

361,929 cells •

Leader et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

7,871 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

37,260 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,163,088 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

22,288 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Rattus norvegicus' with tax_id '10116''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal 10x 3' v2

Single Cell Portal

40,880 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

279 cells •

Ziegler et al., 2020

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

58,090 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Rattus norvegicus' with tax_id '10116''

⚠️

Organism: No organisms are linked to ontology terms

Fat cell +10 Normal 10x 3' v3

Single Cell Portal

6,367 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

36,900 cells •

Plasschaert et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

128,016 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Mixed 10x 3' v1

Single Cell Portal

75,056 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

70,619 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

430 cells •

Patel et al., 2014

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,209 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

7,270 cells •

Leigh et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

25,089 cells •

Liu et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

8,965 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal 10x 3' v3

Single Cell Portal

10,786 cells •

Ariss et al., 2018

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

70,712 cells •

Zilionis et al., 2019

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

746,877 cells •

Paulsen et al., 2022

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Autism spectrum disorder 10x technology

Single Cell Portal

15,729 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Cancer 10x 5' v2

Single Cell Portal

10,658 cells •

Liu et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

3,402 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

1,295,185 cells

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🔧

Organism: No organism found with tax_id '1215360'

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal Slide-seq

Single Cell Portal

3,588 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Normal Seq-well

Single Cell Portal

43,527 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

2,946 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

83 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

37,069 cells •

Ximerakis et al., 2019

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🔧

Cell type: Ontology term with identifier 'MNC' not found

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

100,064 cells •

Wu et al., 2021

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

95,421 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Colon adenocarcinoma 10x 5' v2

Single Cell Portal

18,375 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

35,488 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Obesity disorder 10x 3' v2

Single Cell Portal

2,128 cells •

Kowalczyk et al., 2015

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

30,385 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Mus musculus Normal Single cell library construction

Single Cell Portal

254,910 cells

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⚠️

Cell type: No cell types are linked to ontology terms

Homo sapiens Acute myeloid leukemia +1 10x 3' transcription profiling +1

Single Cell Portal

50,516 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

26,971 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Gallus gallus' with tax_id '9031''

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Normal 10x 3' v3

Single Cell Portal

13,316 cells

Explore

⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

15,458 cells

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🔧

Organism: Multiple matches found for 'Multiple exact matches for 'Sus scrofa' with tax_id '9823''

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Cell type: No cell types are linked to ontology terms

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Organism: No organisms are linked to ontology terms

Influenza Mixed 10x 3' v2

Single Cell Portal

7,585 cells

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Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

60,056 cells

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🔧

Cell type: Ontology term with identifier 'arterial' not found

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Cell type: No cell types are linked to ontology terms

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Organism: No organisms are linked to ontology terms

Single Cell Portal

64,054 cells

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⚠️

Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Single Cell Portal

4,423,680 cells

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Cell type: No cell types are linked to ontology terms

⚠️

Organism: No organisms are linked to ontology terms

Failed Datasets – Single Cell Portal (430)

Single Cell Portal

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Single Cell Portal

Organism

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Technology

Single Cell Portal

Organism

Cell type

Tissue

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Disease

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Technology

Single Cell Portal

Organism

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Tissue

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Disease

Sex

Technology

Single Cell Portal

Organism

Cell type

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Disease

Sex

Technology

Single Cell Portal

Organism

Cell type

Tissue

Developmental stage

Disease

Sex

Technology

Single Cell Portal

Organism

Cell type

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Developmental stage

Disease

Sex

Technology

Single Cell Portal

Organism

Cell type

Tissue

Developmental stage

Disease

Sex

Technology

Single Cell Portal

Organism

Cell type

Tissue

Developmental stage

Disease

Sex

Technology

Single Cell Portal

Organism

Cell type

Tissue

Developmental stage

Disease

Sex